Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2629 ATGGTGGATTCAAGTGGGAAAGGATCAGAGTCGTCCGAGGAGAAAAGCCCTAACTCCGCCGCCAAGAGCCCCAGCAACAGTGGAGAGCAGAAGAAGACATGCGCCGACTGCGGCACCTCCAAGACCCCTCTCTGGAGGGGTGGCCCCGCTGGCCCCAAGTCACTATGCAACGCTTGCGGGATCAGGAGCCGCAAGAAGAAGAGAGCCACCATTTTGGGAATCACTAAGGGTACCGGCGACGACCCCAAAAAAGGGAAAAGGAGCAGCAGCAACAACAATAGCAAGGTAAAGCTTGGAGTAGGAGGAGGCGATAGCTTGAATTTGAAGCAGAGGTTGTGGGCTTTGGGGAGGCAAGTGTTGATGCAGAGATCCAATCATTCCCACACCCACAGGAACAAGCTGGGCGAGGAAGAACAAGCTGCTGTCCTTCTCATGTCCCTCTCTTACGGATCCGTTTATGCCTAA 465 0.5462 MVDSSGKGSESSEEKSPNSAAKSPSNSGEQKKTCADCGTSKTPLWRGGPAGPKSLCNACGIRSRKKKRATILGITKGTGDDPKKGKRSSSNNNSKVKLGVGGGDSLNLKQRLWALGRQVLMQRSNHSHTHRNKLGEEEQAAVLLMSLSYGSVYA* 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2629 154 Pfam GATA zinc finger 34 68 IPR000679 GO:0006355|GO:0043565
Dod05g2629 154 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 28 70 - -
Dod05g2629 154 CDD ZnF_GATA 33 68 IPR000679 GO:0006355|GO:0043565
Dod05g2629 154 ProSitePatterns GATA-type zinc finger domain. 34 59 IPR000679 GO:0006355|GO:0043565
Dod05g2629 154 MobiDBLite consensus disorder prediction 1 37 - -
Dod05g2629 154 SMART GATA_3 28 79 IPR000679 GO:0006355|GO:0043565
Dod05g2629 154 PANTHER OS01G0976800 PROTEIN 8 154 - -
Dod05g2629 154 PANTHER OS01G0976800 PROTEIN 8 154 - -
Dod05g2629 154 MobiDBLite consensus disorder prediction 1 102 - -
Dod05g2629 154 ProSiteProfiles GATA-type zinc finger domain profile. 28 64 IPR000679 GO:0006355|GO:0043565
Dod05g2629 154 Gene3D - 29 97 IPR013088 GO:0006355|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g2629 Dod-Chr5 52523884 52529109 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g2629 30 154 C2C2-Gata Transcription Factor Family AT3G06740 63.492 1.33e-44 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Dod05g2629 GATA 1.6e-16 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2629 - - aprc:113847917 169.088
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g2629 05 52523884 52529109 Dod05g2629 05 52523884 52529109 ECH
Dod05g2629 05 52523884 52529109 Dod01g3325 01 74335425 74336574 ECH