Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2624 ATGGGAGTTGAAAAAGAAGGGATAAAAAGTGAAGGTGGATATGTTGGTGGGTTTTTCCAGTTGTTTGATTGGACCTTGAAATCGCGTAAGAAACTATTTGCAACCAAGTCAGATTTTCCAGAGTCTTTGAAACAGAGAAGAAAAATTGATGGCAATTTGACAATGATGCAGCCCTATCTGGCTAATGAAGATGAAATTGGAGTAGGGGCAAGTATTAGAGGAAGCAGTGATCGTAGTTATGCTTCATCTGTTACAGATGATGAAGTGTGCGGAACAAGGGCCCCTGGTGTAGTTGCCAGGCTTATGGGATTAGATTCCTTGCCCTCTTCCAGTTTTCCCGATCCATATTCTTCCCCATATTTTGATAGCAGTTCTCTCCAAGATGTGCAGCACTGGAGGACCAATCTCAATCAGCAGATCCTGTATTCTGGAAAATTACTTGAAAAGGTTGAGGGCTCTTCTAGGAACTTAATGGAGCCAAAACCTCAAAAGATCCTTAGCAGGCCAATTGAAAAGTTTCAAAAAGAAGTAATGCCTCCCAAATCGGCTAAACCAATTCCTGCTACACACCACAAACTTTTGTCCCCTATTAAGAGTCCGGGCTTTGTTCCAACAAACAATGCTGCTTATATAATGGAGGCTGCTTCAAGAATCATTGAACATGGCCCCCAAGCTACTACAAAGGGTAAAACACCTCTGGTAGCATCATCAACAGTGTCATTGAGAGTTAGAGATCTTAAAGAAAAAGTGGAGGCTTCACAAAAAGCGCCTCTAGTTGGATCATCTTCAATGACATCTAGAGTTAGAGATCAAAAAGAAAAAAGAGAAATTTCTCATAGATCTAGCAGGCTTTCTGAACCGTCTCAAAGGTCAGTTGAGTCTAATTCTGCCAACTCTCTAAGGGGACAATCTTTGAACAAAAGCTGGAATGGAACTGTAGATGCACCTATCAGATCTACTACTGAACCAAAAGAGGATTCTTCTGGGAAGAATATAGGGAAGTCTATTTCGCTTGCAATCCAAGCAAAAGTGAATGTTCAAAGAAGGGAAGGCTTGAGTTTGAGTGCTGGCAGAAGTTCCGTGGACCAGAAAGAACATTCTGACAAAACCAACCAGCCTCTAAAGGCAAACGTTCAAAATAGTTTGCATAAGAAATCCTCCGGTCAAAATGTTTCTGGCGTTCTCAACCAGAATAACATGAAGCAAAACCATTCAATTGAGAAAGAGAAACTACAATCAAAGCAAGTGGTTTCCAATTCACACAGTAGAAAAGTTCTCACTGGGGATTCTGGACGTCATAGAAGCTCTAGTAGTAAATCCACAGCAAAATCTAAAGTTGGATCCAAAAAACCATTCATGCAGGTGACAGATAGTGAAAAGGAAGTTTTGTATACTAGCACAACCAATTTCCCTAGAAAGAAGAGGTCCACAGACAGGGACTGGAATGATAGAGTTGTTGATAAGTTGTTCACTGAGAAAACTCAAAGGCCTCTTCAGTCTAATCTAGTTAGTAATCAACACCATGGTTGGGCTGATGAAGTCAAAAAGAAAGACATGGATGTAGTTTCGTTCACATTTTCCACGCCATTGGCAAGGAACAATTCTGGTTTTGAGAGATCTGGACAAGTTGGCCTGAAGACTGATGGCCTCTACTTGGATCACCACATGAAAAGAGTACTTCTTGACACAGACAGTACAAGGTCTCCAGTAGGATACAATGTGATTGGTGGTGATGCCTTAGGTATTTTCTTGGAACAGAAGTTGAGGGAATTAACAAATGGAGTTGAGACCTCTTGTGGGGGCCCTTTTCAAGGGAGGCCATCTTCTAGTACTGCATCAAAATCAACAGATCTGGCACCCACGCCTAATTCAGTTATTCGGCAGTTGCAACAGAAGAAAGATCAAGACGAGTTGTTGGCAGATAAGCTATATAGAAGCCTTGATTCTGATGTTTCCTTCGCATGTCTTCCTGAATTATCATCCAAACATAGACTCTGGGCTGATGATAAGATGGAGGAGTGCAAGAGAAATCTTATAGAAACACAGTCATTCGACTCATTCAATTACCGATCACCAAGTCCAATCTCTGTTCTTGAGCCTTCCTTTTCGACTGAAAGCTTTGAATCTTCATTCAGCGCAGATGCTGCTAGTACACAAGGAAGCAAGTTGTGCTCATCTTCTCAAGCTTTGAATTTCTCAAGGAAGTCCTATCGAAAGGAAGCTGATACGGATTTGTCTGATTCAGCTTGTTCAACATCAACCGGGACCATGATAAAGAAGCACACAAGTGCATTTGCTCTCATGAATGTTGAAGGATCAGGCACATGGGAGTTGGATTATGTGAATGATATATTATGCAATGTGGGATTGATGTACATGGACTTTGCCATTGGTCGAGCTCGTTACATTGTAAACCCTCACCTATTCAACCAGTTGGAAAGCAGAAGGAAAGGAGGGCATGAGAGTGATGATGGTGAGGCTAGGATAAGAAGGAAAGTCATATTTGATTGTGTGAGTGAATGTTTGGACTTAAGGTGCAGGCGTTGTGTTGGTGGGGGCTACAGAATGTGGGCCAAAGGGATTGCAATGGTGAGAAGAAATGAATGGCTGGCAAGAGAAGTGTACAAGGAAATCTCAAGTTGGAGAGGCATGGGGGATTCCATGGTTGATGAGCTTGTGGACAAGGACATGAGCAGCCAGTATGGACGATGGCTAGATTTTGAAGTTGATACTTTTGAACTCGGTGCAGAGGTTGAGGATCAAATATTTAATTCCTTGGTCGATGATGTTGTTGCTGAAATCTTGCAATTATAA 2814 0.4183 MGVEKEGIKSEGGYVGGFFQLFDWTLKSRKKLFATKSDFPESLKQRRKIDGNLTMMQPYLANEDEIGVGASIRGSSDRSYASSVTDDEVCGTRAPGVVARLMGLDSLPSSSFPDPYSSPYFDSSSLQDVQHWRTNLNQQILYSGKLLEKVEGSSRNLMEPKPQKILSRPIEKFQKEVMPPKSAKPIPATHHKLLSPIKSPGFVPTNNAAYIMEAASRIIEHGPQATTKGKTPLVASSTVSLRVRDLKEKVEASQKAPLVGSSSMTSRVRDQKEKREISHRSSRLSEPSQRSVESNSANSLRGQSLNKSWNGTVDAPIRSTTEPKEDSSGKNIGKSISLAIQAKVNVQRREGLSLSAGRSSVDQKEHSDKTNQPLKANVQNSLHKKSSGQNVSGVLNQNNMKQNHSIEKEKLQSKQVVSNSHSRKVLTGDSGRHRSSSSKSTAKSKVGSKKPFMQVTDSEKEVLYTSTTNFPRKKRSTDRDWNDRVVDKLFTEKTQRPLQSNLVSNQHHGWADEVKKKDMDVVSFTFSTPLARNNSGFERSGQVGLKTDGLYLDHHMKRVLLDTDSTRSPVGYNVIGGDALGIFLEQKLRELTNGVETSCGGPFQGRPSSSTASKSTDLAPTPNSVIRQLQQKKDQDELLADKLYRSLDSDVSFACLPELSSKHRLWADDKMEECKRNLIETQSFDSFNYRSPSPISVLEPSFSTESFESSFSADAASTQGSKLCSSSQALNFSRKSYRKEADTDLSDSACSTSTGTMIKKHTSAFALMNVEGSGTWELDYVNDILCNVGLMYMDFAIGRARYIVNPHLFNQLESRRKGGHESDDGEARIRRKVIFDCVSECLDLRCRRCVGGGYRMWAKGIAMVRRNEWLAREVYKEISSWRGMGDSMVDELVDKDMSSQYGRWLDFEVDTFELGAEVEDQIFNSLVDDVVAEILQL* 938
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2624 937 PANTHER EXPRESSED PROTEIN 1 255 - -
Dod05g2624 937 MobiDBLite consensus disorder prediction 248 332 - -
Dod05g2624 937 Pfam DUF761-associated sequence motif 82 112 IPR032795 -
Dod05g2624 937 MobiDBLite consensus disorder prediction 372 395 - -
Dod05g2624 937 MobiDBLite consensus disorder prediction 412 447 - -
Dod05g2624 937 MobiDBLite consensus disorder prediction 267 283 - -
Dod05g2624 937 PANTHER EXPRESSED PROTEIN 254 935 - -
Dod05g2624 937 MobiDBLite consensus disorder prediction 597 623 - -
Dod05g2624 937 MobiDBLite consensus disorder prediction 408 451 - -
Dod05g2624 937 MobiDBLite consensus disorder prediction 353 395 - -
Dod05g2624 937 Pfam Domain of unknown function (DUF4378) 777 929 IPR025486 -
Dod05g2624 937 MobiDBLite consensus disorder prediction 284 317 - -
Dod05g2624 937 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 254 935 - -
Dod05g2624 937 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 1 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g2624 Dod-Chr5 52480424 52484285 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g2624 776 935 TRM (TON1 Recruiting Motif) Superfamily AT5G26910 39.752 2.74e-32 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2624 - - gmx:102660038 1222.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g2624 05 52480424 52484285 Dod05g2624 05 52480424 52484285 ECH
Dod05g2624 05 52480424 52484285 Dod03g1253 03 15839180 15844504 PCT