Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2613 ATGGCGAAGTCAAAGAACCACACAGCACACAACCAGTCCTATAAGGCTCACAAGAATGGCATCAAGAAGCCAAAGAAGCACCGCCACACTTCCACCAAAGGGATGGATCCCAAGTTTCTGAGGAACCAGAGGTACGCAAGGAAGCATAACAAGAAGAGCGGTGAAGGATCCGCCGAAGAGTAA 183 0.4973 MAKSKNHTAHNQSYKAHKNGIKKPKKHRHTSTKGMDPKFLRNQRYARKHNKKSGEGSAEE* 61
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2613 60 MobiDBLite consensus disorder prediction 1 32 - -
Dod05g2613 60 PANTHER 60S RIBOSOMAL PROTEIN L29 1 60 - -
Dod05g2613 60 Pfam Ribosomal L29e protein family 3 42 IPR002673 GO:0003735|GO:0005840|GO:0006412
Dod05g2613 60 MobiDBLite consensus disorder prediction 1 60 - -
Dod05g2613 60 Gene3D - 1 60 - -
Dod05g2613 60 PANTHER 60S RIBOSOMAL PROTEIN L29 1 60 IPR002673 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g2613 Dod-Chr5 52396862 52397966 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g2613 1 60 Cytoplasmic Ribosomal Protein Gene Family AT3G06700 85.246 3.17e-32 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2613 K02905 - csin:114294630 123.635
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g2613 05 52396862 52397966 Dod05g2613 05 52396862 52397966 ECH
Dod05g2613 05 52396862 52397966 Dod03g1241 03 15709547 15709870 PCT