Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2587 ATGGGAACCCCACCAACGGAAGAGCTAATGAAGAAGATCGAAGAGCTAGAAGAGGGTCACGCGCAGCTCAAGCAAGAGATGTCAAGGCTCAAGCTTTCAGAAGCGAAAGGGCACCACCACCACCATGGCCATCGACAGAGGTCTCAATCGGTGTCGCCGCAGCGTTCCAGATTGGGTGCGCCGCAGTTGAGGAAGGGACCCGATGCTGCCGCAGTATCAGCTGCAGCTTCGTGGAAGAGAGGGTCTTGTTCCTTCAAGCAATCTTCGCCTCTTCAGAGGGAAAGCCGCAGTGATCCTAAAAATGAAAGTGAAGGTGAGGGTGGTGCACGGTGTGGCCCTTCTGCTGTGAATTTCAGTGATAGGCAGTATCTCAATATTTTGCAGTCAATGGGACAGTCTGTTCATATATTGGATCTTACCTCTCGTATCATTTACTGGAACCGTAGTGCTGAAAATCTGTATGGTTATGCAGCGGATGAAGCTCTTGGCCAGGATGGGATTGAGCTGACTGTAGACCCCAGAGATTTTTCCTTGGCAGATGATATTGTGAACCGTGTCATTATGGGGGAGAGCTGGACCGGACAATTCCCTGTCAAGAATAAGAGGGGGGAGAAGTTTTTAGCTGTGGTGACTAATACGCCTTTCTATGACGATGATGGAAGCTTAGTTGGGATTATATGTGTCTCAAGCGATTCGCGGCTCTTTCTTGAAACGAAGGTTCCATGCTCGGGTGTGGGGAAGAATGCTGAATCAGATTCAGGTTCCACCCGTCTCAGAAGTAACATTTCAAATAAACTTGGCCTTGACACTCAGCAGCCACTTCAGGCTGCTCTAGCATCCAAGATCTCGAATTTGGCATCAAAGGTGAGTAACAAAGTTAAGTCAAGAATCCGGACAGGAGAAAATAGTGAAGGCGGGAGCGGAGAAAGTCATCATTCTGAGCATAGTTACCCAGAATCTGTTCTTTCGGACCATAGAGAGGATGCCAATTCCAGTGGAGCTAGCACACCCAGAGGTGATGTGACACCGTCCCCTTTTGGTGTGTTTTCTCACATGGAAGAAAAATCCCAAGGAAAAACTTCGAGAGACTCTGGTGATGAGACTGAAGGGAAATCTTTACACAAGATCATAACTTCTAAGGCTGAAGCATGGATTCAAAAGAAAACATCGTCGTGGCCATGGAAAGCAAATGATCGAGAAGAACCAGAAGCAAGGAATGTTCGTGTTGCTGGGCCTTTGTCGTCAAATGGTCAAGAAAGTGACTCAGTTAATCAGAAGGCTCTTTCTTCTGGCCTTAAGCAAGAAGGCCAGGGAGGTGAAAATAATCGCCCCAGTAACAATGAGGCTTCAGGATTCTGGTCATCCTCCTTTAATGTTAACAGCACAAGTAGTGCCAGCAGCTGTGGAAGTGCTGGCAGTTGTGCTGTCAGTAATAAAGTGGATGTGGACACTGATTGCTTGGATTATGAAATTTTGTGGGAGGATCTGACAATTGGAGAACAAATTGGGCAAGGTTCTTGCGGAACCGTATATCATGCTCTGTGGTATGGATCAGATGTTGCTGTCAAGGTATTCTCAAAGCAGGAATATTCAGATGATGTGATAATGTCCTTCAGACAAGAGGTTTCTGTCATGAAAAGACTTCGACATCCAAATATTCTTCTCTTTATGGGGGCAGTGACTTCACCTCAACGTCTCTGCATTGTGACCGAGTTTCTCCCACGCGGAAGCTTGTGTCGCTTGTTACACAGAAACACATCCAAACTTGACTGGAGACGTCGAGTTCATATGGCCTTAGATATTGCAAGAGGTGTGAATTATCTTCATCATTGCAATCCACCTATCATCCACAGAGATTTGAAGTCTACAAATCTTCTAGTTGATAGGAATTGGACTGTGAAGGTTGCTGATTTTGGTCTTTCTCGTCTTAAGCACGAAACATATCTCACAACTAAGACAGGGAGGGGCACGCCTCAATGGATGGCACCAGAAGTTCTTCGTAATGAACCCTCAGATGAGAAGTCTGACGTATACAGCTTTGGGGTGATATTATGGGAACTTGCAACTGAAAAGATCCCTTGGGAAAATCTCAACTCAATGCAGGTGATTGGAGCTGTAGGGTTCATGGAGCAGCGGCTGGAAATTCCAAAAGATGTTGATCCACGGTGGGCTTCTATAATTCGAGAGCTGCTGGCATAG 2199 0.4638 MGTPPTEELMKKIEELEEGHAQLKQEMSRLKLSEAKGHHHHHGHRQRSQSVSPQRSRLGAPQLRKGPDAAAVSAAASWKRGSCSFKQSSPLQRESRSDPKNESEGEGGARCGPSAVNFSDRQYLNILQSMGQSVHILDLTSRIIYWNRSAENLYGYAADEALGQDGIELTVDPRDFSLADDIVNRVIMGESWTGQFPVKNKRGEKFLAVVTNTPFYDDDGSLVGIICVSSDSRLFLETKVPCSGVGKNAESDSGSTRLRSNISNKLGLDTQQPLQAALASKISNLASKVSNKVKSRIRTGENSEGGSGESHHSEHSYPESVLSDHREDANSSGASTPRGDVTPSPFGVFSHMEEKSQGKTSRDSGDETEGKSLHKIITSKAEAWIQKKTSSWPWKANDREEPEARNVRVAGPLSSNGQESDSVNQKALSSGLKQEGQGGENNRPSNNEASGFWSSSFNVNSTSSASSCGSAGSCAVSNKVDVDTDCLDYEILWEDLTIGEQIGQGSCGTVYHALWYGSDVAVKVFSKQEYSDDVIMSFRQEVSVMKRLRHPNILLFMGAVTSPQRLCIVTEFLPRGSLCRLLHRNTSKLDWRRRVHMALDIARGVNYLHHCNPPIIHRDLKSTNLLVDRNWTVKVADFGLSRLKHETYLTTKTGRGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWENLNSMQVIGAVGFMEQRLEIPKDVDPRWASIIRELLA* 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2587 732 CDD PAS 130 231 IPR000014 -
Dod05g2587 732 MobiDBLite consensus disorder prediction 411 452 - -
Dod05g2587 732 CDD STKc_MAP3K-like 502 727 - -
Dod05g2587 732 Pfam Protein tyrosine and serine/threonine kinase 496 729 IPR001245 GO:0004672|GO:0006468
Dod05g2587 732 Gene3D PAS domain 131 234 - -
Dod05g2587 732 SUPERFAMILY PYP-like sensor domain (PAS domain) 119 231 IPR035965 -
Dod05g2587 732 MobiDBLite consensus disorder prediction 294 326 - -
Dod05g2587 732 PANTHER SERINE/THREONINE-PROTEIN KINASE DDB_G0282963 ISOFORM X1-RELATED 31 728 - -
Dod05g2587 732 SUPERFAMILY Protein kinase-like (PK-like) 485 731 IPR011009 -
Dod05g2587 732 MobiDBLite consensus disorder prediction 291 371 - -
Dod05g2587 732 ProSiteProfiles Protein kinase domain profile. 496 732 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g2587 732 MobiDBLite consensus disorder prediction 14 33 - -
Dod05g2587 732 ProSiteProfiles PAS repeat profile. 119 190 IPR000014 -
Dod05g2587 732 Pfam PAS fold 122 229 IPR013767 GO:0006355
Dod05g2587 732 Gene3D Transferase(Phosphotransferase) domain 1 575 732 - -
Dod05g2587 732 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 31 728 - -
Dod05g2587 732 MobiDBLite consensus disorder prediction 14 71 - -
Dod05g2587 732 ProSitePatterns Serine/Threonine protein kinases active-site signature. 615 627 IPR008271 GO:0004672|GO:0006468
Dod05g2587 732 MobiDBLite consensus disorder prediction 34 48 - -
Dod05g2587 732 SMART serkin_6 496 724 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g2587 732 MobiDBLite consensus disorder prediction 83 114 - -
Dod05g2587 732 SMART pas_2 121 188 IPR000014 -
Dod05g2587 732 MobiDBLite consensus disorder prediction 355 371 - -
Dod05g2587 732 TIGRFAM sensory_box: PAS domain S-box protein 120 231 IPR000014 -
Dod05g2587 732 Coils Coil 6 33 - -
Dod05g2587 732 Gene3D Phosphorylase Kinase; domain 1 489 573 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g2587 Dod-Chr5 52151983 52158391 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g2587 1 727 MAP Kinase Kinase Kinase AT3G06620 60.509 0.0 873
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Dod05g2587 PK_Tyr_Ser-Thr 1.2e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2587 - - pvu:PHAVU_003G114400g 1121.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g2587 05 52151983 52158391 Dod05g2587 05 52151983 52158391 ECH
Dod05g2587 05 52151983 52158391 Dod03g1206 03 15090287 15096757 PCT