Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2580 ATGCTCGAGGCATTGATGAATCTTCTCTCTCTCTGTTGGAAGCCATTCGGGCTCGGTGACGACAAGCTTGACTCCACCGTCGGAGTCATCGGCGGCGCAAAAGAAGGCAAAGACGGCTTGCTGTGGTTCCGCGACGTCGGAAAATATGGCTCCGGCGATTTCTCCATGGCGGTGGTTCAGGCCAACCAGGTACTCGAAGACCAGAGCCAGATCGAGTCAGGTCCCCTCGGCACATTCGTCGGAATATACGACGGTCACGGTGGACCCGACGCGTCGCGATACGTTTGCGATCATCTGTTTCGCCATTTTCGAGCAATATCAGCAGAGTCAAACGGAGTTGTGACAACTAAGACTATTGAAAGGGCATTCTGCCAAACAGAGGAGGGCTACACTGCCCTCGTGTCAGACTTGTGGAGCACTCGGCCTCAGATTGCAAGTGCCGGGTCGTGTTGTCTGGTTGGAGTGATATTTCAGCAGACACTCTTTGTGGCAAACCTTGGAGATTCCCGTGTTGTGTTGGGTAAGAAAGTTGGCAACACTGGAGGCGTTGCTGCAATTCAGCTGTCTACAGAACACAATGCAAATGTTGAGGCTGTTAGGCAGGAGCTGAGAGAATTACACCCAAATGATCCCCAAATTGTTGTCCTCAAACATGGAGTGTGGAGAGTAAAAGGCATTATTCAGGTTTCAAGATCTATAGGTGACGTATATATGAAAAGCGCAGAGTTTAACCGGGAACCACTTAATGCAAAATTCAGGCTTCCTGAACCAATGAACATGCCTATCTTGAGTGCTAGTCCGACTATTATTTCTCATCGTCTCCAACCAAATGATTCCTTCCTTATATTTGCGTCAGATGGTTTATGGGAACACCTAAGTAATGAAAAAGCTGTGGACATTGTCAGCAGCAATCCTCATGCGGGTAGTGCCAAGAGACTAGTGAAGGCGGCCCTACACGAAGCAGCAAGAAAGCGAGAGATGCGATATTCAGACCTGCGTAAGATTGACAAGAAGGTTCGACGGCATTTTCATGATGATATATCTGTTATTGTTTTATTCTTAAACCACGACCTTATATCCAGAGGCACAGTGCTAGACCCACCACTCTCACTTCGTAGCGCCGTCGATCACTGA 1134 0.4859 MLEALMNLLSLCWKPFGLGDDKLDSTVGVIGGAKEGKDGLLWFRDVGKYGSGDFSMAVVQANQVLEDQSQIESGPLGTFVGIYDGHGGPDASRYVCDHLFRHFRAISAESNGVVTTKTIERAFCQTEEGYTALVSDLWSTRPQIASAGSCCLVGVIFQQTLFVANLGDSRVVLGKKVGNTGGVAAIQLSTEHNANVEAVRQELRELHPNDPQIVVLKHGVWRVKGIIQVSRSIGDVYMKSAEFNREPLNAKFRLPEPMNMPILSASPTIISHRLQPNDSFLIFASDGLWEHLSNEKAVDIVSSNPHAGSAKRLVKAALHEAARKREMRYSDLRKIDKKVRRHFHDDISVIVLFLNHDLISRGTVLDPPLSLRSAVDH* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2580 377 CDD PP2Cc 54 354 IPR001932 -
Dod05g2580 377 ProSitePatterns PPM-type phosphatase domain signature. 79 87 IPR000222 GO:0043169
Dod05g2580 377 SMART PP2C_4 40 352 IPR001932 -
Dod05g2580 377 PANTHER ALPHABET, ISOFORM E-RELATED 3 377 - -
Dod05g2580 377 PANTHER PROTEIN PHOSPHATASE 2C 42-RELATED 3 377 - -
Dod05g2580 377 Gene3D - 45 362 IPR036457 -
Dod05g2580 377 ProSiteProfiles PPM-type phosphatase domain profile. 53 354 IPR001932 -
Dod05g2580 377 Pfam Protein phosphatase 2C 77 325 IPR001932 -
Dod05g2580 377 SUPERFAMILY PP2C-like 63 355 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g2580 Dod-Chr5 52092323 52097003 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g2580 1 374 PP2C-type Phosphatase Gene Family AT4G38520 58.747 9.80e-160 452
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2580 K01102 - gmx:100790813 678.707
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g2580 05 52092323 52097003 Dod05g2580 05 52092323 52097003 ECH
Dod05g2580 05 52092323 52097003 Dod03g1201 03 15050594 15055724 PCT