Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2536 ATGATCGTGAGCCAGAACATGGTAGCGGAAGCGGAGATTATATGTCACCAGAAGAGCATTCCGAAGCTGGACGTGAACAAGTATCACTTGTGCGTGGCGCAAGAACACACGGTCAATGTTGAATCTGCGTGCTCTGAGATCGTTAAAGATTCCATTTTGGAGACTCCTGTGATGGGGTTTGTTCCAAATGTGCGTTCTGGTAGCTGTGCTGAAATTGGACCTCGGGATTCTATGGATGATGAACATATTCGGATAGATGATCTAGCTGCCCACCTTGGATTTGTGTCCAAGTGCCCAATACCAAGTGCGTTTTATGCAGTTTTTGATGGGCATGGAGGGCCTGATGCAGCTGCTTTTGTTAAGAAGAATGCTATGAGGTTATTTTTTGAAGATGTTGATATGCTGCAATCGTATGATACTGATGCCATTTTTCTAAAGAAGTTGGAAGACTCTCATCGGAGAGCTTTTTTACGGGCAGACCTTGTGTTGGCTGATGAACAAAGTGTTAGTAGCTCCAGTGGAACTACAGCATTGACTGCCCTTATACTTGGAAGGCATTTGCTGGTTGCTAATGCTGGTGACTGTCGAGCAGTTCTTTGCAGGAGAGGTGCTGCTGTAGATATGTCACAAGACCATAGGCCAACTTATTTACCAGAACAGAGGAGGGTGGAGGAGATGGGTGGCTCCATTGATTATGGATATCTCAATGGTAAACTTTCAGTAACTCGTGCCCTTGGGGATTGGGACTTTAAATTTCCACTTGGTATTTCGTCCCCGCTTATTGCTGAGCCAGATGTCCAGCTCGTTACAGTTGACCGAAGATGA 825 0.4558 MIVSQNMVAEAEIICHQKSIPKLDVNKYHLCVAQEHTVNVESACSEIVKDSILETPVMGFVPNVRSGSCAEIGPRDSMDDEHIRIDDLAAHLGFVSKCPIPSAFYAVFDGHGGPDAAAFVKKNAMRLFFEDVDMLQSYDTDAIFLKKLEDSHRRAFLRADLVLADEQSVSSSSGTTALTALILGRHLLVANAGDCRAVLCRRGAAVDMSQDHRPTYLPEQRRVEEMGGSIDYGYLNGKLSVTRALGDWDFKFPLGISSPLIAEPDVQLVTVDRR* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2536 274 ProSitePatterns PPM-type phosphatase domain signature. 104 112 IPR000222 GO:0043169
Dod05g2536 274 PANTHER PROTEIN PHOSPHATASE 2C 7 271 IPR015655 GO:0004722|GO:0006470
Dod05g2536 274 PANTHER PROTEIN PHOSPHATASE 2C-LIKE PROTEIN 7 271 - -
Dod05g2536 274 Gene3D - 58 274 IPR036457 -
Dod05g2536 274 SUPERFAMILY PP2C-like 57 272 IPR036457 -
Dod05g2536 274 ProSiteProfiles PPM-type phosphatase domain profile. 65 274 IPR001932 -
Dod05g2536 274 CDD PP2Cc 64 267 IPR001932 -
Dod05g2536 274 Pfam Protein phosphatase 2C 67 272 IPR001932 -
Dod05g2536 274 SMART PP2C_4 55 274 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g2536 Dod-Chr5 51629139 51630388 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g2536 1 266 PP2C-type Phosphatase Gene Family AT1G48040 54.325 5.25e-92 275
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBP Dod05g2536 PP2C 6.4e-41 CL0238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2536 K14803 - gmx:100781949 426.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g2536 05 51629139 51630388 Dod05g2536 05 51629139 51630388 ECH