Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2526 ATGGGCTTATCTTCATGTCCATTAATTGAGAACTCTAGCAGCAGCACAGTTAATATGCATGATGGAGAACTTCATGTTGAAGGATCCAGTGATGCAAGGTTAGAAGCAGATCGCAGGAATCAAGGTGATCAAAATTTCAGAGATAGGCTCATCACTGATGAGTACATCCAGCCAGTTACAGGATTTTCTCAGACTGTAAATCAGGTGCAAAAGGAGCATGATTTAGGTTCATTTCGTACTCAATTCCATGATCATACTGATCATATTGATCATCCTTTTGTTGCGACTACCACAATCATAGTTGAACAAAAACTCCAAGATGGTGACACAGACAATGATGAGCCAAAAATTGTTGATACTGGGGAATTGAAGAAGCTTGATAGCTTTGGAAGGTGGATGGACAAGGAGATGGGTGGAGACTGCGATAATTCCTTGATGGCTTCAGATTCTGGCAATTGTTGGAATACGCTTGATGCCGATAACGAGGATAAGGAGGTTTCTAGTTTACGCCACATGCAGTTGGATATGGACTCATTAGGCCCCTCACTTTCCCAAGAACAACTATTTAGTATAATTGATTTTTCTCCAGATTGGGCATATGCTGGGGTTAGATCAAAGGTTTTAATAGTTGGCACATTTCTTGGGAGTAAAAAGCTTTCTAGTCAGACCAAGTGGGGATGTATGTTTGGTGAAATTGAGGTTTCTGCTGAAGTTTTGACAGAGAATGTCATACGGTGCCACACTCCTTTGCATTCACCAGGTCGTGTTCCATTCTATGTTACCTGCAGTAATAGGCTTGCCTGCAGTGAGGTCAGAGAGTTTGAATATCTTGAAAATCCAACTAAATCTGTTGGCCCTGTGGGTATTAAAATCACACCAGAAGATGAAGTACGGCTTCAAATGCGACTGCTTAAACTAGTATACTTGGGACCTGACAAGAAGGGGTGGAAATGCTCTGTTCCTGAATGTGAAAAATGCGAACTTAAACAAACAATGTATTTGATGGGAGATGATGGTGAAGTATTTCAAGAAACTTTCCAGATCGATGGAAGAGACCACATGAACCCTAGGGATGTGTTATTTCAGAGATTAGTGAGAGACAAGCTTTATGAATGGTTGGTATTTAAGGTTCATGAAGGAGAAAAAGGGCCACATGTGCTGGATAGTGAAGGCCAAGGGGTAATACATTTGGCAGCTGCTCTTGGTTATGTGTGGGCTATGGGCCCATTAGTTGCTAGTGGTATCAGTCCTAACTTCAGAGATGCTCACGGAAGAACAGGACTTCACTGGGCGTCATATTTTGGGAGAGAGGAAACTGTGATTGCACTGGTCAAATTAGGAGCAGCTCCAGGTGCTGTTGATGATCCAACATCAGCTTTTCCTCGAGGAAAATCAGCAGCTGATTTTGCTTCAAGTAGAGGACATAAAGGTATTGCTGGATATTTGGCTGAGGCAGATCTGACAAGTCAATTATCTACATTAACTGTCAATGAAAATGAGATGGACAACACTGCCACAACCATAGCGACTGACACTGCTTTTGAGTCTGCTGAAGTTGATTCATCTAATATGACAATGGACGAGCAATACTATCTAAAAGAGTCACTTGCTGCTTTTCGAAAATCAGCTTATGCGGCTGCTTCAATCCAAGCAGCCTTCAGAGCAAGATCATTCCGTCAAAGACAATTAGCCGAAAGTAGCAGTGATATTTCTGAAGCAACACTTGACATAATTGCTGATTCTTTGAACAAGTTTCAGAGGATGGGTCACTTTGAGGATTATTTGCATTCTGCAGCTTTAAGAATTCAAAAGAGATATCGTGGGTGGAAGGGAAGAAAAGATTTTTTGATAATACGCAACCGTGTTGTAAAAATTCAGGCTCATGTTAGAGGTCACCAAGTTCGGAAGCAGTACAAAAAAGTTGTTTGGTCTGTTAGCATTGTGGAAAAGGCAATACTGCGCTGGAGAAGAAAAGGAGTTGGTCTGCGAGGTTTCCGGGTTGAGCAGCCAGTTGGCGTTGAGTCCAAAGATTCTGAGAAAAGTGACGAGTATGAATTTCTTAGCATTGGGCGAAGACAGAAATCTGATGATGTAAAGAAGGCTCTGGATAGAGTAAAGTCAATGGTTCGTAACCCGGACGCCCGTGATCAGTATATGAGGATGAAATATCAGAATTTTAAGAGTGGTGATGGTGGAAGCAGTCAATCACAGCATGTTGACTAG 2223 0.4188 MGLSSCPLIENSSSSTVNMHDGELHVEGSSDARLEADRRNQGDQNFRDRLITDEYIQPVTGFSQTVNQVQKEHDLGSFRTQFHDHTDHIDHPFVATTTIIVEQKLQDGDTDNDEPKIVDTGELKKLDSFGRWMDKEMGGDCDNSLMASDSGNCWNTLDADNEDKEVSSLRHMQLDMDSLGPSLSQEQLFSIIDFSPDWAYAGVRSKVLIVGTFLGSKKLSSQTKWGCMFGEIEVSAEVLTENVIRCHTPLHSPGRVPFYVTCSNRLACSEVREFEYLENPTKSVGPVGIKITPEDEVRLQMRLLKLVYLGPDKKGWKCSVPECEKCELKQTMYLMGDDGEVFQETFQIDGRDHMNPRDVLFQRLVRDKLYEWLVFKVHEGEKGPHVLDSEGQGVIHLAAALGYVWAMGPLVASGISPNFRDAHGRTGLHWASYFGREETVIALVKLGAAPGAVDDPTSAFPRGKSAADFASSRGHKGIAGYLAEADLTSQLSTLTVNENEMDNTATTIATDTAFESAEVDSSNMTMDEQYYLKESLAAFRKSAYAAASIQAAFRARSFRQRQLAESSSDISEATLDIIADSLNKFQRMGHFEDYLHSAALRIQKRYRGWKGRKDFLIIRNRVVKIQAHVRGHQVRKQYKKVVWSVSIVEKAILRWRRKGVGLRGFRVEQPVGVESKDSEKSDEYEFLSIGRRQKSDDVKKALDRVKSMVRNPDARDQYMRMKYQNFKSGDGGSSQSQHVD* 741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2526 740 Gene3D Immunoglobulins 184 283 IPR013783 -
Dod05g2526 740 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 588 645 IPR027417 -
Dod05g2526 740 MobiDBLite consensus disorder prediction 713 740 - -
Dod05g2526 740 MobiDBLite consensus disorder prediction 1 20 - -
Dod05g2526 740 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 21 715 - -
Dod05g2526 740 Gene3D - 367 488 IPR036770 -
Dod05g2526 740 ProSiteProfiles Ankyrin repeat profile. 423 455 IPR002110 GO:0005515
Dod05g2526 740 MobiDBLite consensus disorder prediction 1 23 - -
Dod05g2526 740 Gene3D - 593 642 - -
Dod05g2526 740 ProSiteProfiles IQ motif profile. 618 646 IPR000048 GO:0005515
Dod05g2526 740 SUPERFAMILY E set domains 191 276 IPR014756 -
Dod05g2526 740 Pfam IQ calmodulin-binding motif 596 615 IPR000048 GO:0005515
Dod05g2526 740 Pfam IQ calmodulin-binding motif 621 639 IPR000048 GO:0005515
Dod05g2526 740 SMART iq_5 594 616 IPR000048 GO:0005515
Dod05g2526 740 SMART iq_5 617 639 IPR000048 GO:0005515
Dod05g2526 740 ProSiteProfiles IQ motif profile. 595 624 IPR000048 GO:0005515
Dod05g2526 740 Pfam IPT/TIG domain 191 276 IPR002909 -
Dod05g2526 740 SUPERFAMILY Ankyrin repeat 382 485 IPR036770 -
Dod05g2526 740 ProSiteProfiles Ankyrin repeat region circular profile. 423 455 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g2526 Dod-Chr5 51480997 51484598 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g2526 123 736 CAMTA Transcription Factor Family AT5G09410 41.900 1.62e-164 495
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2526 K21596 - gmx:100818336 1123.61