Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2525 ATGATGGCTGAGACCAGAAGATACGTCCGGAACCAACAATTAGAGCTTGAAGAGATACTAGGAGAAGCAGAAAATCGATGGCTTCGACCTGCTGAAATATGCGAGATACTTCGCAATTATCAGAAGTTTGAGTTAACACCAGATCCACCCGTTAGGCCTTCGGCTGGATCACTGTTCTTGTTCGATCGAAAAGCACTTCGTTATTTTCGCAAGGATGGTCATAGGTGGAGGAAGAAAAAAGATGGGAAGACTGTTAGAGAAGCTCATGAGAAGTTGAAGGCTGGTAGTGTAGATGTCTTGCACTGTTACTATGCTCATGGGGAGGATAATGAAAACTTTCAACGGAGAAGTTATTGGATGCTTGATGAGCAGTTAGAGCACATTGTCTTTGTTCATTATCGTGAAATTAAAGAGGGCTGCAGGTCTGGCATCTCAAATTTCCCTGCAGCTCCAGTAACCTTGGTTGGTAGCTCTCAATCTAGTTCAGTGCCTTCCTCTGCCAAAATAAAGTCACCTATATCTGTATTTCAAACTGCCTTTTACATCAAGTGCATATAA 558 0.4265 MMAETRRYVRNQQLELEEILGEAENRWLRPAEICEILRNYQKFELTPDPPVRPSAGSLFLFDRKALRYFRKDGHRWRKKKDGKTVREAHEKLKAGSVDVLHCYYAHGEDNENFQRRSYWMLDEQLEHIVFVHYREIKEGCRSGISNFPAAPVTLVGSSQSSSVPSSAKIKSPISVFQTAFYIKCI* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2525 185 ProSiteProfiles CG-1 DNA-binding domain profile. 16 142 IPR005559 GO:0003677
Dod05g2525 185 SMART CG_1_2 19 137 IPR005559 GO:0003677
Dod05g2525 185 Pfam CG-1 domain 22 135 IPR005559 GO:0003677
Dod05g2525 185 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 2 144 - -
Dod05g2525 185 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 2 2 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g2525 Dod-Chr5 51477523 51480490 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g2525 2 173 CAMTA Transcription Factor Family AT5G64220 61.143 2.66e-69 225
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2525 K21596 - gmx:100818336 310.457