Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2520 ATGGAGTTGCCTGAGCTGATCATGACTATTACTAGACTCCCTGTTGTCTATAAGCAGAAGGCATTCTATCTTTATCCAGCATGGGCTTACTGTCTTCCTGCTTCCCTCATAAAGATTCCATTCTCATTTCTTGATGCTATTGTATGGACATCAGTAACATATTATGTTATAGGCTACAGCCCTGAGATAACAAGGTTCGTGCGCCAGTTTATTTTGCTTGTTGCTCTTCATATGTCATCAACATCCATGTGCCGTTTCCTTGCCGCGGTTTTCAAAACTGATGTTGCAGCTACAACTGTTGGTTCCTTGGCATTAGTACTGATGTTCTTGTTTGGAGGCTTTATTCTTCCTAGACCATCATTACCATGGTGGTTGAGGTGGGGATTTTGGCTTTCTCCCATGACATATGGTGAAATAGGAATAACACTAAATGAGTTTCTCGCTCCTCGTTGGCAGAAGATCCAACAGGGAAACACCACTGTCGGAAGGACAGTTCTAAGCGATCGCGGTTTAGATTTTGACAGCAAATTCTACTGGATATCAATTGGAGCCTTACTTGGTTTCACAGTATTTTTTGATTGTGGATTCATCTTAGCATTGACTTACTTAAAGCAGCCTAAGGCCTCTCGAGCTTTAGTTTCAAAACAGAAGATATCTCAACTAAAGGAAAAAGAAAATAGCAATTGTGTGGAGCTAAAAAATAAATCAGTCACAGTTGATATTGGCCGCACATCAAATGAAACTCAGAACACAGGGAAAATGGTCCTACCCTTCCAGCCACTATCAATAGCATCTAAGGATGTCCAGTATTTTGTTGAAACCCCTCCGGAGATGAGAAAACATGGTTCCAATGAGAAAAGACTACAATTGCTCCGTGACATCACCGGAGCCTTTAGGCCAGGAATTCTTACTGCATTGATGGGAGTCAGTGGAGCAGGAAAGACAACCCTCATGGATGTCCTTTCAGGAAGAAAAACTGGAGGTGTCATTGAAGGAGACATAAGAATTGGAGGGTACCCCAAAGTGCAGAAGACATTTGCAAGAGTTTCAGGTTACTGTGAGCAGAATGACATTCATTCTCCATATATAACAGTTGAAGAATCTGTCACATACTCGGCTTGGTTGCGGCTGCCAATGGAGAATGATTCAGTCACAAAAGGGAAATTTGTTGAAGAAGTCCTTGAAACAATTGAACTTGATGATGTAAAAGACTGTTTAGTTGGCATCCCTGGTCAAAGTGGCTTATCAACTGAACAACGCAAAAGGCTAACCATTGCAGTGGAGCTTGTTTCCAATCCATCAATAATCTTTATGGATGAACCTACATCAGGCTTGGATGCCCGAGCAGCTGCAGTTGTTATGCGTGCAGTGAAGAATGTTGTTGCCACTGGCAGGACCACTGTTTGCACCATACATCAACCAAGCATTGACATCTTTGAGACTTTTGATGAGTTGATCCTAATGAAAGCCGGAGGACAGATTATTTATAGTGGAATGCTGGGCCATCATTCAAATAAATTGATTGAATATTTTCAGAGTATACCTGGAGTACCAAAGATCAAAGACAACTATAATCCTGCAACCTGGATGTTGGAAGCTACCTCTCCATCAATAGAAAAAGAACTTCAGATAGATTTTGCACAAATATACAAAGAGTCACACCTTTACCAGGATACTGCTGAAATGGTGAGAGAGTTAAGTGAACCACGGCCAGGTTCCAGAGACTTACACTTTTCAACTCGCTTCCCACAAAATACCTTGGGGCAGTTCATGGCATGCCTATGGAAGCAACACTTGTCCTATTGGAGAAGTCCTGAGTACAACTTAACACGCTTCGTATTCATGGTTGTTGCAGCTGTAATCTTTGGGGCAGTTTTTTGGCAGAAAGGGAAGGAAATAAACAATCAGCAGGATCTGTTCAATGTACTTGGATCAATGTATATTGCTGTGATATTCTTGGGCATAAATTACTGTTCAACAATCCTACCATATGTGGCAACCGAGCGCGCTGTCTTGTGCCGAGAAAAATTTGCTGGAATGTATTCTTCCATGGCTTATTCATTTGCACAGGTGGCCATTGAGATACCATATATCTTAGTGCAAGCAATTTTATATGTGGCTATCACATATCCAATGATAGGATTCCATTGGTCAGTTCCGAAAGTCTTTTGGTACTTCTACACCACATTCTGTACATTTTTGTACTTTGTATATCTTGGAATGCTGATAATGTCCTTGAGCACAAATCTGGATATAGCTTCTGTATTGTCAACTGCAATCTACACCATATTCAATCTCTTCTCTGGATTCCTCATGCCAGGACCTAAAATTCCTAAGTGGTGGGTTTGGTGCTATTGGATTTGCCCAACAGCCTGGTCCCTAAATGGACTCCTAACATCACAATATGGAGACATGGACAAGGAGATACACATATTTGGGGAGCTAAAACCAATTGGCTCCTTCCTAAAAGACTACTATGGATTCAGGCATGACAGATTAAGCCTTGTGGCAGTGGTGCTCATTGCCTTTCCAATTATTTATGCTTCTCTCTTTGCCTATTGTATAGGCAAAATGAATTTCCAAAACAGATAG 2592 0.4132 MELPELIMTITRLPVVYKQKAFYLYPAWAYCLPASLIKIPFSFLDAIVWTSVTYYVIGYSPEITRFVRQFILLVALHMSSTSMCRFLAAVFKTDVAATTVGSLALVLMFLFGGFILPRPSLPWWLRWGFWLSPMTYGEIGITLNEFLAPRWQKIQQGNTTVGRTVLSDRGLDFDSKFYWISIGALLGFTVFFDCGFILALTYLKQPKASRALVSKQKISQLKEKENSNCVELKNKSVTVDIGRTSNETQNTGKMVLPFQPLSIASKDVQYFVETPPEMRKHGSNEKRLQLLRDITGAFRPGILTALMGVSGAGKTTLMDVLSGRKTGGVIEGDIRIGGYPKVQKTFARVSGYCEQNDIHSPYITVEESVTYSAWLRLPMENDSVTKGKFVEEVLETIELDDVKDCLVGIPGQSGLSTEQRKRLTIAVELVSNPSIIFMDEPTSGLDARAAAVVMRAVKNVVATGRTTVCTIHQPSIDIFETFDELILMKAGGQIIYSGMLGHHSNKLIEYFQSIPGVPKIKDNYNPATWMLEATSPSIEKELQIDFAQIYKESHLYQDTAEMVRELSEPRPGSRDLHFSTRFPQNTLGQFMACLWKQHLSYWRSPEYNLTRFVFMVVAAVIFGAVFWQKGKEINNQQDLFNVLGSMYIAVIFLGINYCSTILPYVATERAVLCREKFAGMYSSMAYSFAQVAIEIPYILVQAILYVAITYPMIGFHWSVPKVFWYFYTTFCTFLYFVYLGMLIMSLSTNLDIASVLSTAIYTIFNLFSGFLMPGPKIPKWWVWCYWICPTAWSLNGLLTSQYGDMDKEIHIFGELKPIGSFLKDYYGFRHDRLSLVAVVLIAFPIIYASLFAYCIGKMNFQNR* 864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2520 863 Pfam ABC transporter 291 443 IPR003439 GO:0005524
Dod05g2520 863 PANTHER DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN 4 863 - -
Dod05g2520 863 Gene3D - 278 511 IPR027417 -
Dod05g2520 863 CDD ABCG_PDR_domain2 260 498 IPR034003 -
Dod05g2520 863 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 263 516 IPR003439 GO:0005524
Dod05g2520 863 PANTHER ATP-BINDING CASSETTE TRANSPORTER 4 863 - -
Dod05g2520 863 Pfam ABC-2 type transporter 472 531 IPR043926 GO:0140359
Dod05g2520 863 Coils Coil 215 235 - -
Dod05g2520 863 Pfam Plant PDR ABC transporter associated 151 213 IPR013581 -
Dod05g2520 863 SMART AAA_5 300 492 IPR003593 -
Dod05g2520 863 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 288 498 IPR027417 -
Dod05g2520 863 Pfam ABC-2 type transporter 589 801 IPR013525 GO:0016020|GO:0140359
Dod05g2520 863 Pfam ABC-2 type transporter 7 146 IPR013525 GO:0016020|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g2520 Dod-Chr5 51424623 51429182 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g2520 288 475 Calmodulin-binding Proteins AT2G36910 26.923 5.12e-08 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2520 K08711 - gmx:100779615 1524.22