Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2512 ATGGCATCTGATCTGAATTCAGGGCTGTCCAAGAAGACGTTTGTTTTTGGGTTGAAGGCATGGGAATTAATGGGGATACTAGTTGGGTTGTTCATCATAATAATTCTCATGGTGCTATCAATATGTCTCACATTGAGAAAGAAATCCAGAAGAGTCAATGGCATGCTTCCCCTTAGTCATGTGTTATCGGTTTCGGACGAGATCAAAGAGATTAGAGTTGATGATGTTTCAGCAAATAATCAACCCCAAAATGGCGCTTTTATGAGTCTGTATGACAAATTTAGTGACAGGGATTCTGAAAAGGTTTTGATCCAAACAAAGAATGGGGATGATAGCAGTCAGTCAGGCTCATTTGTTCATGCTGAGAAAGATGCTGCTGGTTCTCAATCAGGTGAAGAAAGCGGGGCGAAGTCCGTCTCTGCTTATAGGTCTTCTTCACATCCTATAACTGCACCTTCCCCTTTGTCTGGTCTGCCTGAATTCTCTCACCTTGGCTGGGGGCACTGGTTTACATTAAGGGACCTAGAACTTGCAACAAACAGGTTTTCGAAAGACAATGTTATTGGTGAAGGTGGATATGGAGTTGTTTATCAAGGCAAGCTAATCAATGGGAGTCCTGTGGCTGTTAAGAAGCTTCTTAATAATCTAGGACAAGCCGAAAAGGAATTTAGGGTTGAAGTTGAGGCTATTGGTCATGTGCGACACAAGAACTTGGTCAGACTTTTGGGTTATTGCATTGAAGGCACTCACAGGTTGTTGGTTTATGAGTATGTTAACAATGGCAATTTAGAGCAATGGCTTCATGGAGCCATGCGGCAATATGGTTTTCTTACTTGGGATGCTCGGATTAAAATTCTTCTTGGAACAGCTAAAGCGCTGTCTTACTTGCATGAGGCAATTGAGCCAAAAGTAGTACACCGAGACATTAAGTCAAGCAATATTCTAATTGATGATGACTTCAATGCCAAAATATCTGACTTTGGGCTGGCTAAGTTACTGGGTGCTGGAAAAAGTCATATTACAACTCGAGTAATGGGTACTTTTGGATATGTGGCTCCTGAATACGCCAATTCTGGGTTGCTGAATGAGAAGAGCGATGTTTATAGCTTTGGGGTTTTGCTCCTTGAAGCAATTACTGGAAGAGACCCAGTGGATTATAGCCGACCACCAGCTGAGGTAAATTTGGTTGACTGGCTCAAGATGATGGTAGGGAATAGGCGTGCAGAAGAGGTGGTGGATCCCAACATTGAGACCAGGCCATCAACAAGTGCCCTTAAACGTGCCCTTTTGACTGCTTTGAGGTGTGTAGATCCAGACGCTGAGAAGAGACCAAAGATGAGTCAAGTTGTCCGCATGCTCGAATCAGAGGAGTATCCCATACCTCGAGAGGATCGAAGACGCCGAAGGAGTGAGGCAGGAAATACGGAGTTGGATGGCCAGAAGGAGACTTCTGATACAGATAAGAGTGACAATCCAGATGCTAAGTCCAATGGCAGAAGGAACCAACGGAAGTAG 1515 0.4389 MASDLNSGLSKKTFVFGLKAWELMGILVGLFIIIILMVLSICLTLRKKSRRVNGMLPLSHVLSVSDEIKEIRVDDVSANNQPQNGAFMSLYDKFSDRDSEKVLIQTKNGDDSSQSGSFVHAEKDAAGSQSGEESGAKSVSAYRSSSHPITAPSPLSGLPEFSHLGWGHWFTLRDLELATNRFSKDNVIGEGGYGVVYQGKLINGSPVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGTHRLLVYEYVNNGNLEQWLHGAMRQYGFLTWDARIKILLGTAKALSYLHEAIEPKVVHRDIKSSNILIDDDFNAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVLLLEAITGRDPVDYSRPPAEVNLVDWLKMMVGNRRAEEVVDPNIETRPSTSALKRALLTALRCVDPDAEKRPKMSQVVRMLESEEYPIPREDRRRRRSEAGNTELDGQKETSDTDKSDNPDAKSNGRRNQRK* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2512 504 Gene3D Transferase(Phosphotransferase) domain 1 258 469 - -
Dod05g2512 504 PANTHER OS01G0323000 PROTEIN 2 504 - -
Dod05g2512 504 SUPERFAMILY Protein kinase-like (PK-like) 166 459 IPR011009 -
Dod05g2512 504 PANTHER RECEPTOR-LIKE KINASE PLANT 2 504 - -
Dod05g2512 504 ProSitePatterns Serine/Threonine protein kinases active-site signature. 304 316 IPR008271 GO:0004672|GO:0006468
Dod05g2512 504 MobiDBLite consensus disorder prediction 442 504 - -
Dod05g2512 504 MobiDBLite consensus disorder prediction 131 149 - -
Dod05g2512 504 Pfam Protein kinase domain 183 451 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g2512 504 MobiDBLite consensus disorder prediction 106 149 - -
Dod05g2512 504 SMART serkin_6 182 453 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g2512 504 CDD STKc_IRAK 188 454 - -
Dod05g2512 504 ProSiteProfiles Protein kinase domain profile. 182 459 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g2512 504 ProSitePatterns Protein kinases ATP-binding region signature. 188 211 IPR017441 GO:0005524
Dod05g2512 504 Gene3D Phosphorylase Kinase; domain 1 163 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g2512 Dod-Chr5 51343508 51348708 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g2512 17 456 Trihelix Transcription Factor Family AT1G70460 40.000 2.41e-95 302
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Dod05g2512 Pkinase 7.5e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2512 - - gmx:100793499 903.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g2512 05 51343508 51348708 Dod05g2512 05 51343508 51348708 ECH