Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2506 ATGGTAATTCTAAGCCTTGGAAGGAGGGAGGAGAGAGAGAATAACAAGAAGAAGGAAGTGCAGGGAATGCGACTTGGGAAATATGAATTGGGCAGAACCCTTGGCGAAGGAAACTTCGGAAAAGTCAAGTTTGCAAGGGACACGCATTCTGGACAACCTTTTGCTGTTAAGGTCCTTGAGAAGAACAAGATTATGGAACTCAATGTCACAGATCAGATAAAGAGGGAAATTGCCACCTTAAAGCTTCTCAAGCATCCAAATGTTGTTAGATTATACGAGGTCTTGGCTAGCAAAACAAAAATTTACATGGTACTTGAGTACGTGACTGGAGGGGAGTTATTTGACAAAATTGCATCAAAGGGAAAACTTAACGAAGCTGCAGGTAGGAAATTGTTCCAACAGTTGATCGATGGTGTGAGCTACTGCCACAACAAAGGTGTCTTCCATAGGGATCTCAAGCTTGAGAATGTACTAGTGGATGCCAAAGGGAACATTAAGATAACTGATTTTGGCCTTAGTGCATTACCCCAGCATTTCAGGGCAGATGGGTTGCTGCATACAACTTGTGGAAGTCCTAATTATGTTGCACCAGAGATTCTTGCTAATAGGGGCTATAATGGTGCAACATCAGATGCATGGTCATGTGGTGTTATCTTATACGTAATCCTAACTGGATACCTTCCATTTGATGATAGAAATCTTGCTGTTCTTTATCAAAAGATTTTAAAAGGAGATGTTCAGATACCCAAATGGCTATCTCCTGGTGCACAAAATATGATAAAGAGGATTCTTGATCCCAACCCTGAAACACGGATAACAATGGCCGGGATCAAAGAAGATCCATGGTTCAAGCAAGGATATACACCAGCAAATCCTGAGGATGAGGAAGAGGATGTAAATATTGACAATGAAGCCTTTTCCATCCAGGAAGTGCAACATGATGCTGAGCAGAGGAGTACAGGATCACCAGCACTTATCAATGCATTTCAGTTGATAGGAATGTCTTCATGCCTAGACCTCTCTGGCTTTTTTGAGAAAGAGGATGTCTCTGAGAGGAAGATAAGATTTACATCCAACCTTTCAGCTAAAGATTTGATTGAGAGGATTGAGGATACTGTGACAGAAATGGGATTTACTGTTCAGAAGAAAAATGGCCAATTGAAAGTGACACGAGAGAACAAAACGCATAAAGGTCTAGGCAGCCTCTCAGTGGCAGCAGAGGTGTTTGAAATAAGTCCATCATTGTATGTAGTAGAATTAAGGAAGTCTTATGGAGATGCTTCAGTATATAGACAGTTATGCAAGAAGTTATCAAATGATTTGGGTGTCCCACCAAGGCAAGGGCTGGTTAGCTCAGAAGTGAATTAG 1368 0.4137 MVILSLGRREERENNKKKEVQGMRLGKYELGRTLGEGNFGKVKFARDTHSGQPFAVKVLEKNKIMELNVTDQIKREIATLKLLKHPNVVRLYEVLASKTKIYMVLEYVTGGELFDKIASKGKLNEAAGRKLFQQLIDGVSYCHNKGVFHRDLKLENVLVDAKGNIKITDFGLSALPQHFRADGLLHTTCGSPNYVAPEILANRGYNGATSDAWSCGVILYVILTGYLPFDDRNLAVLYQKILKGDVQIPKWLSPGAQNMIKRILDPNPETRITMAGIKEDPWFKQGYTPANPEDEEEDVNIDNEAFSIQEVQHDAEQRSTGSPALINAFQLIGMSSCLDLSGFFEKEDVSERKIRFTSNLSAKDLIERIEDTVTEMGFTVQKKNGQLKVTRENKTHKGLGSLSVAAEVFEISPSLYVVELRKSYGDASVYRQLCKKLSNDLGVPPRQGLVSSEVN* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2506 455 CDD CIPK_C 327 438 - -
Dod05g2506 455 SUPERFAMILY Protein kinase-like (PK-like) 25 320 IPR011009 -
Dod05g2506 455 ProSiteProfiles Protein kinase domain profile. 28 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g2506 455 Gene3D Transferase(Phosphotransferase) domain 1 108 313 - -
Dod05g2506 455 ProSiteProfiles NAF domain profile. 321 345 IPR018451 GO:0007165
Dod05g2506 455 Pfam NAF domain 323 382 IPR004041 GO:0007165
Dod05g2506 455 Pfam Protein kinase domain 28 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g2506 455 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 19 452 - -
Dod05g2506 455 SMART serkin_6 28 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g2506 455 PANTHER SERINE/THREONINE KINASE 19 452 - -
Dod05g2506 455 ProSitePatterns Serine/Threonine protein kinases active-site signature. 147 159 IPR008271 GO:0004672|GO:0006468
Dod05g2506 455 Gene3D Phosphorylase Kinase; domain 1 11 107 - -
Dod05g2506 455 Gene3D Kinase associated domain 1, KA1 321 443 - -
Dod05g2506 455 ProSitePatterns Protein kinases ATP-binding region signature. 34 57 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g2506 Dod-Chr5 51296476 51302013 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g2506 91 451 CBL-interacting serine-threonine protein kinases AT3G17510 71.625 0.0 517
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Dod05g2506 Pkinase 2e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2506 K07198 - gmx:100777468 741.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g2506 05 51296476 51302013 Dod05g2506 05 51296476 51302013 ECH