Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2485 ATGTGGGGAGGTAGTTCTCCTATATTTGGCTTTGAGATTCTACCTTACCCGATTGACAAACAATTATATTGGGATAATGCATGTAATGATCTGTTTGCATTCTGTAATGTGGTAATTTTAGGCAGAGGCTTGTCGGACTACGCGGAGCACCGGTACTCCGATCGCCATGACTGCAGCTTTGATTATAAGACCGCCAGGAAGGAAGCTATCGCCAGAGAGAATCTGGTGATCCGCGCCCCGAAGATCATCAAGATCGTGGGTGTTCGTCGCCCCGTGGGAGTGAGGTGGTTGGATGGTGGGTGTGGTCGCACTCTGCCACTAGTCGCGGGTCTGGCCTCGAATCTGGTCTCGTCACCTCTGATCTGGTCGCTCCGTCGCGGGACTGGACGTGGTCGCAGTCGCGTCGCCTCTGAGTTGGTCGGGCTTCGCCGCGGGATTAGCCATTCTTCCGCCGCCTGTCTGGTCGCTACTAGCAAGTGGAGGTTGTGGTCGCCGCTGGTCTGGTCGCGCCGCCACTGCTCTGGCCGCTGCAAGTGGTCTCCTTGGGACTTCTCACCATTGATTTGGGGTGGGTTAAGTTTGGGTGGTGAGATGAGAAGGGAGGGGCTAGTGTGA 615 0.5577 MWGGSSPIFGFEILPYPIDKQLYWDNACNDLFAFCNVVILGRGLSDYAEHRYSDRHDCSFDYKTARKEAIARENLVIRAPKIIKIVGVRRPVGVRWLDGGCGRTLPLVAGLASNLVSSPLIWSLRRGTGRGRSRVASELVGLRRGISHSSAACLVATSKWRLWSPLVWSRRHCSGRCKWSPWDFSPLIWGGLSLGGEMRREGLV* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2485 204 SUPERFAMILY AN1-like Zinc finger 48 80 IPR035896 -
Dod05g2485 204 Gene3D - 47 80 IPR035896 -
Dod05g2485 204 PANTHER AN1-LIKE ZINC FINGER PROTEIN 48 85 - -
Dod05g2485 204 PANTHER AN1-TYPE ZINC FINGER PROTEIN 48 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g2485 Dod-Chr5 51134704 51137474 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g2485 50 85 C2H2 Transcription Factor Family AT3G52800 47.222 6.71e-06 43.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2485 - - sspl:121767796 67.781