Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dod05g2482 | ATGGGAACATTGGAGGAGCAAATTGATGCTCATCAAACCCAGTCATCATCATCTTCATCTTCTTCCATTGATAGCACCAACCACCCTTCTTCTAGGATTACACCACTAACCTCTTCCTCTTATTCATCACTTTGCCTCTCAAGTTTATGCAGAAGAAACACCAGCAACACCAACAACAGAACGGACTTGAGCACTGACCTCAGACTTGGTCTTAGCATCTCTCCTTCCTCCCAGTCTGAATTGCCAACCAACTCAACAAGGGAGCAAGGCTTGGATTGGCCACCAATTAAGTCCATATTGAGGTGCACCCTTGTTGAGAAACAAAACCAGCAAAGCCAAAGACCCTCTTTATTTGTCAAGGTCTACATGGAAGGCATCCCCATAGGCAGAAAATTAAATCTGCTGGCACACCATAGTTATGATGGACTTGTAAAAGCTCTTGGCCGCATGTTCAGGACCACCATTCTCTGCCCTAGCTCTCAGCCACTCAATTCTGGCAATTTTCATGTTCTAACTTATGAGGACCAAGAAGGGGACTGGATGATGGTTGGAGATGTGCCTTGGGAGATGTTCTTGACCAGTGTGAAGAGGCTGAAGATCACAAGAGCTGACAGATGCTAG | 621 | 0.4573 | MGTLEEQIDAHQTQSSSSSSSSIDSTNHPSSRITPLTSSSYSSLCLSSLCRRNTSNTNNRTDLSTDLRLGLSISPSSQSELPTNSTREQGLDWPPIKSILRCTLVEKQNQQSQRPSLFVKVYMEGIPIGRKLNLLAHHSYDGLVKALGRMFRTTILCPSSQPLNSGNFHVLTYEDQEGDWMMVGDVPWEMFLTSVKRLKITRADRC* | 207 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dod05g2482 | 206 | PANTHER | AUXIN-RESPONSIVE PROTEIN IAA17 | 18 | 206 | IPR003311 | GO:0005634|GO:0006355 | |
Dod05g2482 | 206 | MobiDBLite | consensus disorder prediction | 1 | 38 | - | - | |
Dod05g2482 | 206 | Gene3D | - | 110 | 206 | - | - | |
Dod05g2482 | 206 | SUPERFAMILY | CAD & PB1 domains | 110 | 200 | - | - | |
Dod05g2482 | 206 | Pfam | AUX/IAA family | 17 | 202 | IPR033389 | - | |
Dod05g2482 | 206 | ProSiteProfiles | PB1 domain profile. | 116 | 205 | IPR000270 | GO:0005515 | |
Dod05g2482 | 206 | PANTHER | AUXIN-RESPONSIVE PROTEIN IAA31 | 18 | 206 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dod05g2482 | Dod-Chr5 | 51120777 | 51122585 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Dod05g2482 | 106 | 206 | B3 DNA Binding Superfamily | AT2G46530 | 34.653 | 1.85e-11 | 60.8 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | AUX/IAA | Dod05g2482 | AUX_IAA | 3.2e-36 | CL0072 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Dod05g2482 | 05 | 51120777 | 51122585 | Dod05g2482 | 05 | 51120777 | 51122585 | ECH |