Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2481 ATGTTCAAAACAAGCAAGAGTTATGAGGGCATGAGGGTACTACTTTGGGTGTTTGGGTTTATAGGCTTGGTGTTTGTGAAATGGGGTGAAGGCATTGAGGATGCCAATGTGACAGACATGCAATATGTCAACAACAGACCATTGATGGTTGGCCTTACTCTTGTTAAAGGTGCTGCTGCCAAAGGAGCTGTTTGTCTGGATGGATCTTTACCGGGTTACCACTTCCACCCTGGATACGGTTCGGGCTCCAACAGTTGGCTCATACAATTGGAGGGAGGAGGCTGGTGTGGAAATGTCCGAAATTGCATTTACAGTAAGAGAACACGGCATGGTTCATCAGTATTTATGGAGAAACAGATACCATTTATTGGGATATTGAGCAACAAACCTGAGGAAAACCCAGATTTTTTCAATTGGAATAGAATAAAAATTCGTTATTGTGATGGTGCATCATTTAGTGGAGACAGCCAAAATCAGAGAGCAGGGTTGTATTTCAGAGGGCAGCGCATCTGGCAAGCTGCTATGGAAGATTTAATGTCGAGAGGAATGCGCTATGCCAAACAGGCTCTTCTATCTGGATGTTCAGCAGGAGGTTTAGCAACTATACTACATTGTGATGAATTTCGAGAATTGTTCCCTAGAACCACAAGAGTAAAGTGCTTAAGTGATGCTGGATTGTTCCTTGATGCTGTTGATGTATCTGGCCATCGTAGTTTGAGGAATTTGTTCGGAGGTGTGGTCACCTTGCAGGGATCACGAAAAAACCTTCCGAGGAGTTGTACCAGTCGCCTCAACCCAATTTTGTGCTTTTTCCCTCAGTACTCAATTGCCAGCGTTAGGACACCACTGTTTCTTCTCAATGCAGCTTATGATACTTGGCAGATTCAAGCCAGCATAGCTCCACCATCTGCCGATTATCATTGGAATTGGGATGATTGCAGGAAAAATTATGCACGTTGCAGCGCACCACAGATACAATATCTGCAGGGTTTTCGGAATCAGATGCTTGGAGCTGTAAGAGGCTTCTCAAGGTCGCGTCAAAATGGGTTATTCATAAATTCATGTTTCGCCCATTGCCAATCTGAAAGACAGGATACATGGTTTGCTCGTGAATCTCCCCATATTGGAAATAGAGGTATAGCACAGTCGGTTGGAAACTGGTATTTTGACCGAGTTCAAGTCCAGGCTATCGGTTGTCCTTACCCTTGTGACAAAACCTGCCATAATTTGGTTTTCAACTGA 1242 0.4404 MFKTSKSYEGMRVLLWVFGFIGLVFVKWGEGIEDANVTDMQYVNNRPLMVGLTLVKGAAAKGAVCLDGSLPGYHFHPGYGSGSNSWLIQLEGGGWCGNVRNCIYSKRTRHGSSVFMEKQIPFIGILSNKPEENPDFFNWNRIKIRYCDGASFSGDSQNQRAGLYFRGQRIWQAAMEDLMSRGMRYAKQALLSGCSAGGLATILHCDEFRELFPRTTRVKCLSDAGLFLDAVDVSGHRSLRNLFGGVVTLQGSRKNLPRSCTSRLNPILCFFPQYSIASVRTPLFLLNAAYDTWQIQASIAPPSADYHWNWDDCRKNYARCSAPQIQYLQGFRNQMLGAVRGFSRSRQNGLFINSCFAHCQSERQDTWFARESPHIGNRGIAQSVGNWYFDRVQVQAIGCPYPCDKTCHNLVFN* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2481 413 Pfam Pectinacetylesterase 45 392 IPR004963 GO:0016787
Dod05g2481 413 PANTHER PECTIN ACETYLESTERASE 18 412 - -
Dod05g2481 413 PANTHER NOTUM-RELATED 18 412 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g2481 Dod-Chr5 51106641 51112199 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g2481 49 412 Carbohydrate Esterase AT1G57590 69.231 0.0 551
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2481 K19882 - gmx:100791571 745.347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g2481 05 51106641 51112199 Dod05g2481 05 51106641 51112199 ECH
Dod05g2481 05 51106641 51112199 Dod01g3234 01 73335703 73340577 ECH
Dod05g2481 05 51106641 51112199 Dod06g1923 06 28195820 28200724 ECH