Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2475 ATGCGAGATGCAATGAACAAGCTTGGTGGTGATTCTAACAAAATTAACCCCTTGGTACCAGTAGATCTTGTCGTTGATCACTCAGTTCAAGTTGATGTGGCAAGATCAAAAAATGCAGTTCAGGCAAATATGGAACTTGAATTCCAGAGGAACAAGGAAAGATTTGGCTTCCTCAAATGGGGTTCAAATGCATTCAATAATATGCTTGTTGTTCCTCATGGATCAGGGATAGTTCACCAGGTCAATTTAGAATACCTTGGTAGAGTTGTGTTCAACACAAATGGTGTGCTATATCCTGACAGCGTTGTTGGAACTGATTCACACACAACTATGATAGATGGCTTGGGTGTTGCTGGATGGGGAGTTGGTGGAATTGAAGCAGAAGCTGCTATGCTTGGCCAGGAATATTTGAACGTGAAGTCCAAGGAGATAGGGCATAGTAACATGTACTTTCCACAGGCATCTCCTTTGTTCACCTTTACAAACCAAGTTGGATTGGATATGCTTGAAACTACTCTCAGCGCCCTTCAAGATATAATGCTTGGTCAAGTTCTTGATGAAGCTAGTAGGAAGGTTCTATGCTCTGAGTTTTCCAAGATAATGCAACAGGTGATTAACACCTCAAGTAATGCTATGTCTAAAGAACTTCTATCTTTTCTGCATATACATATATTGCAAGATGAGCATGGCGTTGGTGCATATGGACTTGGTAACTGA 717 0.41 MRDAMNKLGGDSNKINPLVPVDLVVDHSVQVDVARSKNAVQANMELEFQRNKERFGFLKWGSNAFNNMLVVPHGSGIVHQVNLEYLGRVVFNTNGVLYPDSVVGTDSHTTMIDGLGVAGWGVGGIEAEAAMLGQEYLNVKSKEIGHSNMYFPQASPLFTFTNQVGLDMLETTLSALQDIMLGQVLDEASRKVLCSEFSKIMQQVINTSSNAMSKELLSFLHIHILQDEHGVGAYGLGN* 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2475 238 Pfam Aconitase family (aconitate hydratase) 1 144 IPR001030 -
Dod05g2475 238 PANTHER ACONITASE/IRON-RESPONSIVE ELEMENT FAMILY MEMBER 1 136 IPR006249 -
Dod05g2475 238 SUPERFAMILY Aconitase iron-sulfur domain 1 143 IPR036008 -
Dod05g2475 238 Gene3D Aconitase, domain 3 1 139 IPR015931 -
Dod05g2475 238 PANTHER CYTOPLASMIC-LIKE ACONITATE HYDRATASE 1 136 - -
Dod05g2475 238 Pfam MEKHLA domain 153 205 IPR013978 -
Dod05g2475 238 PRINTS Aconitase family signature 44 57 IPR001030 -
Dod05g2475 238 PRINTS Aconitase family signature 68 76 IPR001030 -
Dod05g2475 238 PRINTS Aconitase family signature 97 110 IPR001030 -
Dod05g2475 238 PRINTS Aconitase family signature 111 126 IPR001030 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g2475 Dod-Chr5 51071783 51076392 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g2475 154 203 Homeobox Transcription Factor Family AT2G34710 78.000 3.04e-19 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2475 K01681 - gmx:100499625 253.832