Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2472 ATGAAAGCATACATGGCAGCTTTAGCAAAGACAAGTCATCTTGTGAGCCTGCTGCTGGTAATAGGGTTGTGCTTGTGCACCTCAGTTGTTGTAGAGACCAGGCATGTGAGCATCAAGAACAGTTTAGGATCTGGGAAGAACATGACCCTGCATTGCCAATCTAAAGATAATGACATGGGCAATCAGACCTTAGCAAATGGGGATGAATTTGGCTGGGACTTCTCTGACAATATTGCTGGAACCACACTCTTTTTCTGTGATATGGGATGGGAAAGAGTTCAGGGGTACCACTTTGATGCGTATTATTTCCACCGGGACTTCGAACGTTGTGATGCTGGATGTTCATGGCTGGTATCCGCTGAAGGCATTTACGGCTTAAATGGCCAAACAGGGTTATGGGAATTCATATACAATTGGCCAAACTGA 426 0.4507 MKAYMAALAKTSHLVSLLLVIGLCLCTSVVVETRHVSIKNSLGSGKNMTLHCQSKDNDMGNQTLANGDEFGWDFSDNIAGTTLFFCDMGWERVQGYHFDAYYFHRDFERCDAGCSWLVSAEGIYGLNGQTGLWEFIYNWPN* 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2472 141 PANTHER PUMILIO HOMOLOG 15-LIKE 23 124 - -
Dod05g2472 141 PANTHER - 23 124 IPR010264 -
Dod05g2472 141 Pfam Plant self-incompatibility protein S1 35 139 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g2472 Dod-Chr5 51063625 51064475 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g2472 36 139 Carbohydrate Esterase AT3G16970 30.841 7.16e-13 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2472 - - gmx:102670225 217.624