Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2469 ATGGCTGGTTTGAACCCTGAGTTAGAGCTCTTTGCTGGAACAGATAAAGCTACTCCTCATGTCAGGGAGAGTGTTGGTGATAGTAATGTTGATAAAACAAGTGATGATGCCTCCCTGATGCATTTCTCTGCTAACTGGCCAATGCCAGCATCTGGACTGAATGCAGCGGTTCCAACTCAGTTTACTATCATCTTTGATGGGAGCACTTTTGTCTATGATGGAGTTCCTGCAGAAAAGGTGCAAGAAATCATGCTTATTGCTGCTGCCTATGCCAAGTCTGCTGAAGTGAAGGTTGGGAAACAATCCTCCTTTACTCCACTCATTCCAACAAGCCCTTCTTCTCCACAAGGAAACTCTAACAATTTGGCTTCACAGCAATCAGTGTGCTTTCCTCCAGAGAAGAGTTCCATTTGCAGGCTGGAAGAATTTCCATTAGCACGCAGACAGTCACTTCAAAGGTTTCTTGAGAAGCGAAGAGACAGGTTGTGTAGCAAAGCCCCTTATGCCCTATCCAAAGGAGTGTCTGGCAACATGGAGAACAACTTCTGTGCTAACAATCCACCAGATTTTTTTCCCTTTAAACAATCAAAGGAAGGATTTCAGGCAAGTCTTGCTGCCTCTTGA 624 0.4471 MAGLNPELELFAGTDKATPHVRESVGDSNVDKTSDDASLMHFSANWPMPASGLNAAVPTQFTIIFDGSTFVYDGVPAEKVQEIMLIAAAYAKSAEVKVGKQSSFTPLIPTSPSSPQGNSNNLASQQSVCFPPEKSSICRLEEFPLARRQSLQRFLEKRRDRLCSKAPYALSKGVSGNMENNFCANNPPDFFPFKQSKEGFQASLAAS* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2469 207 PANTHER DIVERGENT CCT MOTIF PROTEIN 1 184 - -
Dod05g2469 207 SMART tify_2 54 89 IPR010399 -
Dod05g2469 207 MobiDBLite consensus disorder prediction 13 32 - -
Dod05g2469 207 ProSiteProfiles Tify domain profile. 54 89 IPR010399 -
Dod05g2469 207 Pfam tify domain 58 88 IPR010399 -
Dod05g2469 207 Pfam Jas motif 144 168 IPR018467 -
Dod05g2469 207 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 1 184 IPR040390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g2469 Dod-Chr5 51029131 51033850 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g2469 58 171 Tify Gene Family AT5G20900 47.541 1.09e-23 91.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Dod05g2469 tify 3.4e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2469 K13464 - gmx:100306655 175.637
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g2469 05 51029131 51033850 Dod03g1640 03 22832597 22836741 PCT