Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2467 ATGGAGTTCTATGTTGAGGACTCAGCATCTTTTACAATAGGCCAGGCTATATATGAAGCAGCCCTTATCATTGCAGTTCTGAGATGGGTGTTGTGCTTGGTTTTCAGGGTGATCAAAGATAGGAGGACACGTTCTCTTGACACCCCAACAACTGAGCCATCTTCTTCTTCTTCTACTTCATTGGTTTCTTCACAAATGATAAGGGACAACACTCTTTTGTTGACTACCTTTGGTGAGATCGTGGAGAGGCTTCCTGGCACAGAAGACACGTGTGCTGTTTGCTTGAACCAGCTGAGAATGGAAGATGAGGTTAGGGAGCTCATGAACTGTTACCATGTGTTCCACAGGGAGTGCATAGATAGATGGTTGGATCATGAAGACAATGACCACCACCACAACCCTACTTGTCCTCTCTGCAGGGCCCCTTTGCTCACTTCTTATTGCTTCTCATCAGAGAGCTCTGGCTGTGTGCCTCCACCTCAGCCTAGTTGGGCTGTGGAGAGACTTCTCTACCTCTTTGGGGATGATCTTTTGCCCTGTTAA 543 0.4696 MEFYVEDSASFTIGQAIYEAALIIAVLRWVLCLVFRVIKDRRTRSLDTPTTEPSSSSSTSLVSSQMIRDNTLLLTTFGEIVERLPGTEDTCAVCLNQLRMEDEVRELMNCYHVFHRECIDRWLDHEDNDHHHNPTCPLCRAPLLTSYCFSSESSGCVPPPQPSWAVERLLYLFGDDLLPC* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2467 180 SUPERFAMILY RING/U-box 86 146 - -
Dod05g2467 180 PANTHER RING ZINC FINGER PROTEIN-RELATED 1 179 - -
Dod05g2467 180 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 74 146 IPR013083 -
Dod05g2467 180 ProSiteProfiles Zinc finger RING-type profile. 91 140 IPR001841 -
Dod05g2467 180 Pfam Ring finger domain 89 140 IPR001841 -
Dod05g2467 180 SMART ring_2 91 139 IPR001841 -
Dod05g2467 180 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 1 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g2467 Dod-Chr5 51019879 51021158 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g2467 1 179 C3H Transcription Factor Family AT3G43430 48.913 3.65e-43 140