Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2462 ATGGCTCTTCCTTCCACAAAAGAGCCATCAAGAACACCCACCATCACGCTCACCTTATTGTTGATGCTGCTGCTCCTCGGACACTGCAACCCCTTAGTCTCTGGAGCTCACCCTGATTTCGTGGGATCAGCCTGCCTCAAAGTCACACCTTCAGAATTCATTACCGCTTCAATGGAAGTTATTGGTGTCATAGAAGATGTTGCATCCATATTGTCCAAGTTCAGCGGTGGATTTGGCAATTCTCGCCTCGCCAACGCCATTCTTGACTGCCTTGATTTGCTTGACATGTCCTCCGATGACCTCAACTGGTCTGTCTCCGCTACTCAGAATCCCACAGGCAAGCACAACAGTACTGGGAACCTAGGCTCAGATTTGAAGACATGGCTAAGTGCTGTCCTAACGAATCCAGACACATGCTTGGAGGGGTTCGAAGGTACAAGCAGCATTGTCAAAGGTTTAGTGTCCGCTGGCCTAGGACAAGTGATGACGCTGGCGAAGAAACTACTCACCAAGGTCGATGTCCCCCACGTTAACGTCTCCGACAACTTCGGTGCCAGCAAGAAGGGACACTTCCCTTCGTGGGTGAAGCCAGAGGAGAGGAAGCTTCTAGAAGCGAATGGGGTGGCTGCGGATGCTGTGGTGGCTGCGGATGGGACAGGGAACTTCACGAAGGTTATGGATGCGGTGATGGCGGCACCTGACTATAGCATGAAGAGGTTTGTGATATACGTGAAGAAGGGGGTTTATAATGAGTACGTTGAGATCAAGAAGAAGAAGTGGAATATTATGATGATGGGGGATGGTATCACTGCCACCGTTATCACCGGCAACCGGAATGTGGTCGACGGCTGGACTACCTTCCGTTCAGCCACCTTTGGTAAGAAAGGATAA 891 0.5062 MALPSTKEPSRTPTITLTLLLMLLLLGHCNPLVSGAHPDFVGSACLKVTPSEFITASMEVIGVIEDVASILSKFSGGFGNSRLANAILDCLDLLDMSSDDLNWSVSATQNPTGKHNSTGNLGSDLKTWLSAVLTNPDTCLEGFEGTSSIVKGLVSAGLGQVMTLAKKLLTKVDVPHVNVSDNFGASKKGHFPSWVKPEERKLLEANGVAADAVVAADGTGNFTKVMDAVMAAPDYSMKRFVIYVKKGVYNEYVEIKKKKWNIMMMGDGITATVITGNRNVVDGWTTFRSATFGKKG* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2462 296 Pfam Plant invertase/pectin methylesterase inhibitor 80 159 IPR006501 GO:0004857
Dod05g2462 296 Pfam Pectinesterase 211 296 IPR000070 GO:0030599|GO:0042545
Dod05g2462 296 PANTHER PECTINESTERASE 48 296 - -
Dod05g2462 296 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 44-RELATED 48 296 - -
Dod05g2462 296 SUPERFAMILY Pectin lyase-like 208 293 IPR011050 -
Dod05g2462 296 SMART PMEI_2 36 158 IPR006501 GO:0004857
Dod05g2462 296 ProSitePatterns Pectinesterase signature 1. 236 255 IPR018040 -
Dod05g2462 296 CDD PMEI-like_4 38 170 - -
Dod05g2462 296 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 63 164 IPR035513 -
Dod05g2462 296 Gene3D Invertase/pectin methylesterase inhibitor family protein 40 173 IPR035513 -
Dod05g2462 296 Gene3D - 205 296 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g2462 Dod-Chr5 50954570 50956316 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g2462 19 296 Carbohydrate Esterase AT3G43270 53.819 1.46e-100 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2462 K01051 - gmx:100814987 342.043