Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2459 ATGGCATCAAGAAAAGTTTCTACTATTCAAATGGTGGTTCTGCCGATCTTGCTACTGAATTGCATTGTTTTGCTGGGTCAAGGTGCCAGGGTTAAGTACACAGAAGGAGAGGATTTGGTGACAGCAACATGCAAGCACACCCTTCATTATCAAATATGTATTTCTTCCTTAAGATCAGTTCCTGGTAGCAAGACATGTGGTGATCTCAAAGGGCTTGCTAAGATTGCATTGAATCTGAGCACACAAGCTGCTGAAAAGACATTGTCCTATGTCTATGAGCTCAAATCCTCTTCTGCTGCCGGTGGCACCAATAACAACAACAACACTTACATGTCAAGTTGCTTAAGTGACTGTGAAGAGGAATACTCGGAAGCCATAGGGAACCTGCAAGACGCATCACAAGCACTTGAAAATGGGGAATATGACCAAGTGGATACTTTGGTCTCGGCAGCTATGTCAGATGCTGAGACATGTCAGGATGGCTTAAGGGACTCTCTCAGTCTCAGTTACAACAATGGTTCCTCGTCAACTCTTACTGAGCGCGCTAGTTATTTTTCTGACTTATGTAGTAATGTTCTAGCCATTGTAAAACTATTATCTTAA 603 0.4262 MASRKVSTIQMVVLPILLLNCIVLLGQGARVKYTEGEDLVTATCKHTLHYQICISSLRSVPGSKTCGDLKGLAKIALNLSTQAAEKTLSYVYELKSSSAAGGTNNNNNTYMSSCLSDCEEEYSEAIGNLQDASQALENGEYDQVDTLVSAAMSDAETCQDGLRDSLSLSYNNGSSSTLTERASYFSDLCSNVLAIVKLLS* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2459 200 TIGRFAM PME_inhib: pectinesterase inhibitor domain 16 199 IPR006501 GO:0004857
Dod05g2459 200 CDD PMEI-like_1 39 199 - -
Dod05g2459 200 PANTHER PECTINESTERASE INHIBITOR-LIKE 23 199 - -
Dod05g2459 200 PANTHER OS05G0360900 PROTEIN 23 199 - -
Dod05g2459 200 Pfam Plant invertase/pectin methylesterase inhibitor 38 195 IPR006501 GO:0004857
Dod05g2459 200 Gene3D Invertase/pectin methylesterase inhibitor family protein 35 199 IPR035513 -
Dod05g2459 200 SMART PMEI_2 35 195 IPR006501 GO:0004857
Dod05g2459 200 Coils Coil 115 135 - -
Dod05g2459 200 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 38 199 IPR035513 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g2459 39 197 Carbohydrate Esterase AT1G53830 25.904 5.74e-06 44.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2459 - - aprc:113848191 221.09