Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2452 ATGGGAAGAGAAAGAGAAACACCGAAGCAGCAGGTTTCATATACAGTGGAGCAGCTGGTGGCCCTTAATCGATACAATCCTGATATTCTCCCCGATCTCGAAAACTATGTCAACGAACAGGTTACAGAGGGAACTTACAGCCTCGACGCAAATCTCTGCCTTCTTCGCCTCTACCAGTTTGAACCGGATAAAATGAGTTCTCAGATTGTGGCCCGCATATTGATTAAGGCACTTATGGCAATGCCAGCTCCAGACTTCAGCCTCTGCCTCTTTTTGATTCCTGAACGAGTGCAAATGGAGGAGCAGTTCAAGACACTCATTGTTCTGTCACACTATCTAGAGACAGGAAGATTTCGGCAGTTCTGGGATGAAGCATTAAAAAGTCGTCAGATAGTTGAAGCTGTTCCAGGATTTGAGCAGGCAATCCGAGGCTATGCCATTCATGTCCTTTCCCTTACCTACCAAAAGGTTCCTAGAACTGTGCTTGCTGAGGCAGTCAACATAGAAGGTTTATCATTGGACAAATTCCTCGAACACCAAGTAGCCAACAGTGGCTGGGCTATTGAGAAGAGCCAAGGCAAGGGTCAACTCATTGTACTTCCGAGAAATGAATTTAATGACCCAGTTTTGAAGAAAAACTCTGCAGATAGTGTACCATTGGAGCACATTACTCGCATCTTCCCTATTCTTAGCTGA 696 0.4526 MGRERETPKQQVSYTVEQLVALNRYNPDILPDLENYVNEQVTEGTYSLDANLCLLRLYQFEPDKMSSQIVARILIKALMAMPAPDFSLCLFLIPERVQMEEQFKTLIVLSHYLETGRFRQFWDEALKSRQIVEAVPGFEQAIRGYAIHVLSLTYQKVPRTVLAEAVNIEGLSLDKFLEHQVANSGWAIEKSQGKGQLIVLPRNEFNDPVLKKNSADSVPLEHITRIFPILS* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2452 231 SUPERFAMILY ARM repeat 8 133 IPR016024 -
Dod05g2452 231 Gene3D - 127 230 IPR036388 -
Dod05g2452 231 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 11 6 230 IPR009374 GO:0003743|GO:0005737|GO:0005852
Dod05g2452 231 Pfam CSN8/PSMD8/EIF3K family 66 192 IPR033464 -
Dod05g2452 231 Gene3D ARM repeat; domain 1 7 124 IPR016020 GO:0003743|GO:0005852|GO:0006446|GO:0043022
Dod05g2452 231 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT K 6 230 - -
Dod05g2452 231 Hamap Eukaryotic translation initiation factor 3 subunit K [EIF3K]. 7 231 IPR009374 GO:0003743|GO:0005737|GO:0005852
Dod05g2452 231 ProSiteProfiles PCI domain profile. 46 205 IPR000717 -
Dod05g2452 231 SUPERFAMILY "Winged helix" DNA-binding domain 136 228 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g2452 Dod-Chr5 50873661 50876166 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g2452 1 231 Eukaryotic Initiation Factors Gene Family AT4G33250 74.892 1.34e-128 360