Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2447 ATGGCCAAAGGAGGGAAGCTAACAAAGCTCAAGTCAGTGCTCAAGAAATGGAACTCATTCGGCAACAGCGGCAACGGCAGCAAGCACAGCCGCCACAGCATCAGCGCCGTCGTCGCCGAAGACGACGAGTCGTTCTCCCCCTTCTCCTCCTCCTCCGCCAGGTCCGACCTCCACCCTGTCTACGTCGGGAAGTCCCGCCGCCTCTACCGCGTCACCTCCGACGTCGTCGACCACCCTCTCTTCCGCGAACTCGTCGAGAGGTCACGTGACGAACAACACCACCACGACACCACCGCCGGCACCACCACCACTACCATCAATGTGGCGTGCGAGGTTGTCCTCTTCGAACACCTCCTCTGGATGCTCGAGAATGCTGATCCTCAACCCGAGTCCCTCGACGAACTCGTCGACTTCTACGCTTGCCAATAA 429 0.5991 MAKGGKLTKLKSVLKKWNSFGNSGNGSKHSRHSISAVVAEDDESFSPFSSSSARSDLHPVYVGKSRRLYRVTSDVVDHPLFRELVERSRDEQHHHDTTAGTTTTTINVACEVVLFEHLLWMLENADPQPESLDELVDFYACQ* 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2447 142 Pfam Auxin responsive protein 10 122 IPR003676 GO:0009733
Dod05g2447 142 PANTHER SMALL AUXIN-UP RNA-RELATED 4 141 - -
Dod05g2447 142 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 4 141 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g2447 Dod-Chr5 50797669 50798785 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g2447 6 124 Calmodulin-binding Proteins AT3G43120 25.547 5.20e-07 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2447 - - gmx:100792286 189.119