Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2445 ATGGAAGATACTGGAAGCCCCAAATTGTCTGGAATCAGGCAGATAGTGAGACTAAAGGAAATGTTTCAGAAATGGCATACTGTCACCCTTGGCTCAAAAGGGTCTAATGAACATTCTGATGTGAATCATGTGGGCATATCACCCATAATAAACAAAAGGCTAAAAAATGTCGTGTATTGCGACTCTGATGAGGATAGCTGCCACAGCCCTGAACCTCCACATGATGTTCCCAAAGGATACTTGGCGGTCTATGTCGGGCCGGAGCTTCGGAGATTCATCATTCCCACCAGCTACCTTAGCCACTCTTTGTTCCAAGTGTTGCTGGAAAAGACTGCAGAAGAGTTTGGGTTTGATCATAGTGGTGGACTCACAATCCCATGTGAGATTGAGACCTTCAAATTCCTCCTGAATTGCATGGAGAAGGAGAACCATCGGAAAGAGAACCATGATGACAGCTCTTCTAGAAACTCAGGAACTATAGAAGAGTAA 489 0.4458 MEDTGSPKLSGIRQIVRLKEMFQKWHTVTLGSKGSNEHSDVNHVGISPIINKRLKNVVYCDSDEDSCHSPEPPHDVPKGYLAVYVGPELRRFIIPTSYLSHSLFQVLLEKTAEEFGFDHSGGLTIPCEIETFKFLLNCMEKENHRKENHDDSSSRNSGTIEE* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2445 162 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 7 154 IPR003676 GO:0009733
Dod05g2445 162 PANTHER SMALL AUXIN-UP RNA-RELATED 7 154 - -
Dod05g2445 162 Pfam Auxin responsive protein 62 138 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g2445 Dod-Chr5 50758406 50760371 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g2445 1 162 Calmodulin-binding Proteins AT3G43120 62.130 2.16e-70 208
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2445 K14488 - gmx:100795275 261.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g2445 05 50758406 50760371 Dod03g1620 03 22440537 22443570 PCT