Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2439 ATGCAAACACATAATCGATACACCCTCACCCCCTTCATTCTCTTGTTTCTCTCATGCTCCTCCACCATTACAGCAGCACAAGATCTGCTCCGTTCATCATGCATGCACGCCAGGTACCCCACCCTCTGCGTCCAAACCCTCTCCACCCTCACCGCTCCTTCCACCACCCCCTTGAACCTCGCCCAAGCTGCCGTTAAGGTTAGCCTCTCCCACACCACCGCCCTCTCCGCTTACCTCAACACTCTGCAGTCACAATTGCAGGGCCCCTCGCTTGGCTCCACCAAGAGGCAACAAGTCGCCGTGAACGACTGCGCCGCTCAGGTTTCCGACTCGGTGGTCGAGTTGACCCGCACGCTCACCGAGTTGCAGCACATGCGCGTCGGGATGGCGTCGTTTCAGTGGCACATGAGCAACGCCCAGACGTGGACCAGCGCCGCCTTGACCGACGGCCAGTCGTGCCTCAACGGGTTCAAGGACGGTGGTGACGGCAACGGGAAGGTTGCTTTGGAAGTGAAGCGTAGGGTGAATAGCGTGGCCATGCTCACCAGCAATGCTTTGTACCTTATTACTAGACTCGGTGGTGGTAATGGCGTAGGTGGGAAGCCTCATCATCGCTCAAATAACATTAAAAACTGA 636 0.5708 MQTHNRYTLTPFILLFLSCSSTITAAQDLLRSSCMHARYPTLCVQTLSTLTAPSTTPLNLAQAAVKVSLSHTTALSAYLNTLQSQLQGPSLGSTKRQQVAVNDCAAQVSDSVVELTRTLTELQHMRVGMASFQWHMSNAQTWTSAALTDGQSCLNGFKDGGDGNGKVALEVKRRVNSVAMLTSNALYLITRLGGGNGVGGKPHHRSNNIKN* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2439 211 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
Dod05g2439 211 SMART PMEI_2 25 188 IPR006501 GO:0004857
Dod05g2439 211 Pfam Plant invertase/pectin methylesterase inhibitor 29 187 IPR006501 GO:0004857
Dod05g2439 211 PANTHER PECTINESTERASE INHIBITOR-LIKE 8 194 - -
Dod05g2439 211 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 27 192 IPR035513 -
Dod05g2439 211 CDD PMEI-like_3 32 192 - -
Dod05g2439 211 Gene3D Invertase/pectin methylesterase inhibitor family protein 24 192 IPR035513 -
Dod05g2439 211 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR 8 194 - -
Dod05g2439 211 Coils Coil 210 211 - -
Dod05g2439 211 TIGRFAM PME_inhib: pectinesterase inhibitor domain 10 192 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g2439 Dod-Chr5 50706006 50706760 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g2439 29 192 Carbohydrate Esterase AT3G14310 29.518 4.90e-13 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2439 - - adu:107496239 209.149