Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2428 ATGTCGAGCTCATCGGAATATTCAGGTGTTTCCGGCGTTAAGGCGGCGAAGTCGCCGGAGAAATCCACGTTCTCTCAGACTTGCAGTCTTCTGAGCCAATACCTTAAGGTAAAGGGCAGCTTCGGTGACCTCACCCTCGGAATTACACGCACCACCACCGAAACGAACGGGTCACCTGAGACATCATGCCACTCTGCAACAACCATGGACCTGTTTCCGACAAAGGAAAACAATGTCAAGCCACAAAACCTGACAACTATGGATCTGCTCTACCCGCATGGTCGCCACTCCGCCGAGGAGGTTCCAACCTTGGTGAAATCTAGTGCATTTAAGTGTGTGGGTAAAGAGGGCAAAGGTGCGCAGTTGACAATCTTTTATGGTGGTCAAGTTATGGTGTTCGATGATTTTCCTGCCGAGAAAGTGGAGGAGATAATGTCCCTTGCCGGAAAAGGGGTATCCCAAGGCCACAACCATAACTCCTCTGCACACGCTTACACCAGCCAGGGTCACCACTACCTGTCTCAACCACCATTATCCAGACCTCCTATTGTTTGCGATCTGCCAATTGCTAGGAAAGCTTCACTCCATCGCTTCCTGGAGAAGAGAAAGGATAGAATTGCTGCCAAAGCACCATATCAAACCAGCAATCCTGTGTCGGCCCCTAATAGAGCAGCTGAATCTGTGGCGTGGCTTGGGTTAGGAGCTAAGTCAACGCTGTAG 720 0.5056 MSSSSEYSGVSGVKAAKSPEKSTFSQTCSLLSQYLKVKGSFGDLTLGITRTTTETNGSPETSCHSATTMDLFPTKENNVKPQNLTTMDLLYPHGRHSAEEVPTLVKSSAFKCVGKEGKGAQLTIFYGGQVMVFDDFPAEKVEEIMSLAGKGVSQGHNHNSSAHAYTSQGHHYLSQPPLSRPPIVCDLPIARKASLHRFLEKRKDRIAAKAPYQTSNPVSAPNRAAESVAWLGLGAKSTL* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2428 239 ProSiteProfiles Tify domain profile. 115 150 IPR010399 -
Dod05g2428 239 PANTHER PROTEIN TIFY 10A 18 234 - -
Dod05g2428 239 SMART tify_2 115 150 IPR010399 -
Dod05g2428 239 Pfam tify domain 118 149 IPR010399 -
Dod05g2428 239 Pfam Jas motif 188 213 IPR018467 -
Dod05g2428 239 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 18 234 IPR040390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g2428 Dod-Chr5 50571736 50573848 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g2428 1 236 Tify Gene Family AT1G19180 41.538 9.82e-49 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Dod05g2428 tify 1e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2428 K13464 - gmx:100527510 286.574
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g2428 05 50571736 50573848 Dod03g1598 03 21950565 21953451 PCT