Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2425 ATGAGTAGAGGGGTGCAAAGTACCGTGAACGAGGAGGTACAGGTACACGTGCCAAGCACGAACCAAAGCAGGGCTTCCGAAACCATCGGCAGACAGGATGGTGGTGGCGGCAGCGGTGGTGGTGGTGGAGGAACTGGGGAATCAAAGAAAGGGACGACGATGAGGAGCGGCATGGGAGACCTCATAATGGTGAATGATGAGAAGGGCGTGTTTGGGCTGACGGATTTGATGAAGGCTGCGGCTGAGGTTTTGGGGAACGGTGGGTTAGGTTCAACGTACAAGGCTGCCATGGCGAATGGGTTGTCTGTGGTGGTGAAGAGGATGCGGGAAATGAACAGAGTTAGCAGAGATATATTTGATGCTGAGATGAGACGATTTGGGAGGCTCAGGAACCGCAACATCTTGACACCTCTCTCTTACCATTACCGCAAGGAGGAGAAGCTCTTTGTCACTGAATACATGCCCAAAGGAAGCTTGTTATATGTCTTGCATGGTGATAGAGGAATAAGCCATGCTGAACTGACATGGCCTACCCGTTTGAAGATAGTGAAGGGAATAGCAAAAGGGTTGGCCTTTCTTTATTCTGAATTTTCTTCAGAAGACCTACCCCATGGGAACCTCAAGTCTAGCAACGTTCTACTAACTGATAATTATGAAGCTCTCCTAAGCGACTATGCATTTCATCCACTCATCAACCAAGGCCATGCGGTGCAGACAATGTTTGCCTACAAAACTCCTGATTACGTTCAATACCAGCAAATATCACAGAAGACTGATGTTTACTGCCTCGGAATCATCATTCTTGAGATCATCACCGGGAAATTCCCTTCTCAGTATCACAGTAATGGCAAGGGTGGCACTAATGTTGTGCAGTGGGTCTTCATAGCAATTTCTGATAGAAGAGAGGCAGAACTGATTGATCCGCAGTTGAAGAGCGACACAAATTCAATCAATCAGATGCTTCAGCTTCTCCAGATTGGGGCTGCTTGCACCGAAAGCAACCCTGAACAAAGACTTACCATGAAGGAAGCCATTAGGAGGATAGAAGAGGTGCATGTTTAA 1062 0.4765 MSRGVQSTVNEEVQVHVPSTNQSRASETIGRQDGGGGSGGGGGGTGESKKGTTMRSGMGDLIMVNDEKGVFGLTDLMKAAAEVLGNGGLGSTYKAAMANGLSVVVKRMREMNRVSRDIFDAEMRRFGRLRNRNILTPLSYHYRKEEKLFVTEYMPKGSLLYVLHGDRGISHAELTWPTRLKIVKGIAKGLAFLYSEFSSEDLPHGNLKSSNVLLTDNYEALLSDYAFHPLINQGHAVQTMFAYKTPDYVQYQQISQKTDVYCLGIIILEIITGKFPSQYHSNGKGGTNVVQWVFIAISDRREAELIDPQLKSDTNSINQMLQLLQIGAACTESNPEQRLTMKEAIRRIEEVHV* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2425 353 Gene3D Phosphorylase Kinase; domain 1 50 153 - -
Dod05g2425 353 PANTHER LRR RECEPTOR-LIKE KINASE 15 353 - -
Dod05g2425 353 Pfam Protein kinase domain 82 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g2425 353 ProSiteProfiles Protein kinase domain profile. 78 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g2425 353 MobiDBLite consensus disorder prediction 1 55 - -
Dod05g2425 353 SUPERFAMILY Protein kinase-like (PK-like) 82 348 IPR011009 -
Dod05g2425 353 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 15 353 - -
Dod05g2425 353 Gene3D Transferase(Phosphotransferase) domain 1 154 353 - -
Dod05g2425 353 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g2425 Dod-Chr5 50546705 50548220 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g2425 11 351 Receptor kinase-like Gene Family AT3G42880 61.290 6.66e-153 442
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Dod05g2425 Pkinase 3.7e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2425 - - lja:Lj5g3v1749280.1 548.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g2425 05 50546705 50548220 Dod03g1595 03 21885636 21889229 PCT