Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2416 ATGGCCTCAATTTCCTTCTCCTTCGTTATTCTTCTAAAACTCGTACTTGTCTTGCTCGTACCATGTTGTGTACCGCAATCAGCCATTGCCATTGCCACCAAGAAGACCTACATAGTTCACATGAAACAGCACCGCAACCCCACCATGTACCCAACCCACGAAGACTGGTACACTGCCACTCTCCAGTACCATAACTCCCACTCCGATTCCCTCCTCTATTCATACACAACCGCTTATAACGGCTTCGCCGCTTCCCTCAACACTCACCAAGCCCAATTACTACGCGCTTCCAATTCGGTGCTCGGAGTGTACGAGGACACACTCTACACTCTCCACACAACTCGAACCCCCCAGTTCTTGGGCCTCGAAACGGCCTCAAACTTGTGGGAAGGCCACACCATTCAAGAACTCGACCATGCCTCCCGCGACATCATCATCGGGGTCCTCGACACCGGCGTATGGCCCGAAACCAAGAGCTTCGACGACTCCCACATGTCTCCCATCCCCACGCGCTGGCGGGGCCAGTGCGAGTCCGCCTCGGATTTCGATCCTTCACTCTGCAATAAGAAGCTCATCGGCGCTCGCTCCTTCGCCAGGGGCTACCTCTTGGCCTCCGGCGGCGGTTACATGCTCAAGGCCAAGGAGGAAGTGTCCCCACGCGACCGTGACGGACATGGCACACACACTGCAACCACCGCCGCGGGATCCGCCGTCGCCAACGCCACGCTCCTCGGCTACGCCACCGGGACCGCGCATGGAATGGCGCCGCAGGCGCGCGTGGCTTCCTACAAGGTCTGCTGGACCGGCGGATGTTTCGCCTCCGACATTCTCGCCGGGATGGACCAGGCCATCCAGGACGGCGTCGACGTTCTCTCGCTTTCCCTCGGCGGTTCCTCCGTCGCGTACCACCGCGACACCATAGCAATCGGGGCCTTCGCGGCGGTGCAGAGGGGAATCTTTGTCTCGTGCTCCGCAGGGAACAGCGGTCCGCGGCGTGGCTCGCTCGCCAATGTGGCTCCGTGGATCATGACCGTCGGAGCCGGAACCCTAGATCGTGATTTCCCGGCGTACGTTTCGATTGGGAACGGAAAACGTTTCGGCGGCGTTTCGCTGTACGGTGGAGAAGGCATGGGCGAAAAACCGGTCGGTTTGATTTATTTCAACGAGCGGTCCAACTCGTCGAGCAGCGTTTGCATGCCCGGTTCGCTCGAACCGGCCCTCGTGCGCGGGAAGGTGGTGGTTTGCGACAGGGGGCTCAACGCGCGTGCGGAGAAGAGTGCTGTTGTGCGCGATGCCGGTGGGGTTGGGATGATTCTTGCGAACACGGCGGCGAGTGGGGAGGAACTTGTGGCGGATAGTCACCTGCTACCGGCTGTGGCGGTTGGGAGAAGCGCGGGTGATCAGATCAAGGAGTACACATCGTCGGATCCTAATCCAACGGCTGTGCTGAGCTTCGGTGGAACTGTTCTGAACGTGAGGCCTTCACCAGTAGTGGCTGCGTTCAGTTCTCGTGGGCCGAATGGGGTGACCGCTCAGATACTGAAACCGGATATTATTGGGCCTGGGGTTAACATCTTAGCGGGATGGTCCGAAGCCATTGGCCCATCGGGCCTGTCTCAGGACACTCGGAAAACCCAATTCAACATCATGTCAGGTACGTCAATGTCTTGTCCCCACATAAGTGGCTTGGCTGCATTGCTGAAAGCAGCGCATCCAGATTGGAGCCCAAGTGCAATCAAATCTGCACTCATGACAAGTGCTTATACACATGACAACACCAATTCCCCTCTAAAGGATGCAGCTGGAGAAGCCTTATCCACACCGTGGGCTCATGGTGCTGGTTATGTCAACCCGCAGAAGGCCTTCTCTCCTGGACTAGTCTATGATGCAACCACTCAGGATTACATTGCCTTCCTTTGCTCCTTGGACTATACTCCTGACCAAGTACAACTCATTGTCAAGAGTGCCAATGTGAATTGTTCCGTCAAGTTTGATGACCCTGGCCAGTTGAATTACCCGTCGTTCTCGGTTGTGTTTGGAAGCAAGGGGGTTGTTCGGTACACTCGCACTTTGACTAATGTAGGAGCTGCAGGATCCGTCTTTGATGTGGATGTGAGTGGGCCTTCCTTGGTTGAAATAACGGTGAATCCCACAAGGCTTGTGTTTGGACAAGTTGGGGAGAGACAAAGTTATACAGTGACCTTTGTGTCCAACAAGGGTGTTGATGATTCTTTTAGGACTGAATTTGGTAGCATTGTGTGGAGCAATGGGCAGCACCTAGTTAGGAGCCCAGTTGCTTTTGCATGGTCAGATGATTCCTGA 2322 0.5594 MASISFSFVILLKLVLVLLVPCCVPQSAIAIATKKTYIVHMKQHRNPTMYPTHEDWYTATLQYHNSHSDSLLYSYTTAYNGFAASLNTHQAQLLRASNSVLGVYEDTLYTLHTTRTPQFLGLETASNLWEGHTIQELDHASRDIIIGVLDTGVWPETKSFDDSHMSPIPTRWRGQCESASDFDPSLCNKKLIGARSFARGYLLASGGGYMLKAKEEVSPRDRDGHGTHTATTAAGSAVANATLLGYATGTAHGMAPQARVASYKVCWTGGCFASDILAGMDQAIQDGVDVLSLSLGGSSVAYHRDTIAIGAFAAVQRGIFVSCSAGNSGPRRGSLANVAPWIMTVGAGTLDRDFPAYVSIGNGKRFGGVSLYGGEGMGEKPVGLIYFNERSNSSSSVCMPGSLEPALVRGKVVVCDRGLNARAEKSAVVRDAGGVGMILANTAASGEELVADSHLLPAVAVGRSAGDQIKEYTSSDPNPTAVLSFGGTVLNVRPSPVVAAFSSRGPNGVTAQILKPDIIGPGVNILAGWSEAIGPSGLSQDTRKTQFNIMSGTSMSCPHISGLAALLKAAHPDWSPSAIKSALMTSAYTHDNTNSPLKDAAGEALSTPWAHGAGYVNPQKAFSPGLVYDATTQDYIAFLCSLDYTPDQVQLIVKSANVNCSVKFDDPGQLNYPSFSVVFGSKGVVRYTRTLTNVGAAGSVFDVDVSGPSLVEITVNPTRLVFGQVGERQSYTVTFVSNKGVDDSFRTEFGSIVWSNGQHLVRSPVAFAWSDDS* 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2416 773 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 26 112 IPR037045 -
Dod05g2416 773 ProSiteProfiles Serine proteases, subtilase domain profile. 119 622 - -
Dod05g2416 773 CDD Peptidases_S8_3 109 588 IPR034197 -
Dod05g2416 773 Gene3D - 351 490 - -
Dod05g2416 773 PANTHER CUCUMISIN-RELATED 26 770 - -
Dod05g2416 773 Pfam PA domain 406 469 IPR003137 -
Dod05g2416 773 Gene3D Peptidase S8/S53 domain 143 635 IPR036852 GO:0004252|GO:0006508
Dod05g2416 773 PRINTS Subtilisin serine protease family (S8) signature 141 160 IPR015500 -
Dod05g2416 773 PRINTS Subtilisin serine protease family (S8) signature 551 567 IPR015500 -
Dod05g2416 773 PRINTS Subtilisin serine protease family (S8) signature 221 234 IPR015500 -
Dod05g2416 773 Pfam Fibronectin type-III domain 669 766 IPR041469 -
Dod05g2416 773 CDD PA_subtilisin_like 357 481 - -
Dod05g2416 773 ProSitePatterns Serine proteases, subtilase family, serine active site. 552 562 IPR023828 -
Dod05g2416 773 Pfam Peptidase inhibitor I9 36 112 IPR010259 -
Dod05g2416 773 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 26 770 IPR045051 -
Dod05g2416 773 SUPERFAMILY Subtilisin-like 111 626 IPR036852 GO:0004252|GO:0006508
Dod05g2416 773 Gene3D - 639 769 - -
Dod05g2416 773 Pfam Subtilase family 142 590 IPR000209 GO:0006508|GO:0008236
Dod05g2416 773 SUPERFAMILY Protease propeptides/inhibitors 35 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g2416 Dod-Chr5 50464675 50467593 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g2416 34 770 Subtilisin-like Serine Gene Family AT2G05920 67.615 0.0 1025
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2416 - - adu:107457896 1232.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g2416 05 50464675 50467593 Dod03g1579 03 21627872 21631384 PCT