LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dod05g2416	ATGGCCTCAATTTCCTTCTCCTTCGTTATTCTTCTAAAACTCGTACTTGTCTTGCTCGTACCATGTTGTGTACCGCAATCAGCCATTGCCATTGCCACCAAGAAGACCTACATAGTTCACATGAAACAGCACCGCAACCCCACCATGTACCCAACCCACGAAGACTGGTACACTGCCACTCTCCAGTACCATAACTCCCACTCCGATTCCCTCCTCTATTCATACACAACCGCTTATAACGGCTTCGCCGCTTCCCTCAACACTCACCAAGCCCAATTACTACGCGCTTCCAATTCGGTGCTCGGAGTGTACGAGGACACACTCTACACTCTCCACACAACTCGAACCCCCCAGTTCTTGGGCCTCGAAACGGCCTCAAACTTGTGGGAAGGCCACACCATTCAAGAACTCGACCATGCCTCCCGCGACATCATCATCGGGGTCCTCGACACCGGCGTATGGCCCGAAACCAAGAGCTTCGACGACTCCCACATGTCTCCCATCCCCACGCGCTGGCGGGGCCAGTGCGAGTCCGCCTCGGATTTCGATCCTTCACTCTGCAATAAGAAGCTCATCGGCGCTCGCTCCTTCGCCAGGGGCTACCTCTTGGCCTCCGGCGGCGGTTACATGCTCAAGGCCAAGGAGGAAGTGTCCCCACGCGACCGTGACGGACATGGCACACACACTGCAACCACCGCCGCGGGATCCGCCGTCGCCAACGCCACGCTCCTCGGCTACGCCACCGGGACCGCGCATGGAATGGCGCCGCAGGCGCGCGTGGCTTCCTACAAGGTCTGCTGGACCGGCGGATGTTTCGCCTCCGACATTCTCGCCGGGATGGACCAGGCCATCCAGGACGGCGTCGACGTTCTCTCGCTTTCCCTCGGCGGTTCCTCCGTCGCGTACCACCGCGACACCATAGCAATCGGGGCCTTCGCGGCGGTGCAGAGGGGAATCTTTGTCTCGTGCTCCGCAGGGAACAGCGGTCCGCGGCGTGGCTCGCTCGCCAATGTGGCTCCGTGGATCATGACCGTCGGAGCCGGAACCCTAGATCGTGATTTCCCGGCGTACGTTTCGATTGGGAACGGAAAACGTTTCGGCGGCGTTTCGCTGTACGGTGGAGAAGGCATGGGCGAAAAACCGGTCGGTTTGATTTATTTCAACGAGCGGTCCAACTCGTCGAGCAGCGTTTGCATGCCCGGTTCGCTCGAACCGGCCCTCGTGCGCGGGAAGGTGGTGGTTTGCGACAGGGGGCTCAACGCGCGTGCGGAGAAGAGTGCTGTTGTGCGCGATGCCGGTGGGGTTGGGATGATTCTTGCGAACACGGCGGCGAGTGGGGAGGAACTTGTGGCGGATAGTCACCTGCTACCGGCTGTGGCGGTTGGGAGAAGCGCGGGTGATCAGATCAAGGAGTACACATCGTCGGATCCTAATCCAACGGCTGTGCTGAGCTTCGGTGGAACTGTTCTGAACGTGAGGCCTTCACCAGTAGTGGCTGCGTTCAGTTCTCGTGGGCCGAATGGGGTGACCGCTCAGATACTGAAACCGGATATTATTGGGCCTGGGGTTAACATCTTAGCGGGATGGTCCGAAGCCATTGGCCCATCGGGCCTGTCTCAGGACACTCGGAAAACCCAATTCAACATCATGTCAGGTACGTCAATGTCTTGTCCCCACATAAGTGGCTTGGCTGCATTGCTGAAAGCAGCGCATCCAGATTGGAGCCCAAGTGCAATCAAATCTGCACTCATGACAAGTGCTTATACACATGACAACACCAATTCCCCTCTAAAGGATGCAGCTGGAGAAGCCTTATCCACACCGTGGGCTCATGGTGCTGGTTATGTCAACCCGCAGAAGGCCTTCTCTCCTGGACTAGTCTATGATGCAACCACTCAGGATTACATTGCCTTCCTTTGCTCCTTGGACTATACTCCTGACCAAGTACAACTCATTGTCAAGAGTGCCAATGTGAATTGTTCCGTCAAGTTTGATGACCCTGGCCAGTTGAATTACCCGTCGTTCTCGGTTGTGTTTGGAAGCAAGGGGGTTGTTCGGTACACTCGCACTTTGACTAATGTAGGAGCTGCAGGATCCGTCTTTGATGTGGATGTGAGTGGGCCTTCCTTGGTTGAAATAACGGTGAATCCCACAAGGCTTGTGTTTGGACAAGTTGGGGAGAGACAAAGTTATACAGTGACCTTTGTGTCCAACAAGGGTGTTGATGATTCTTTTAGGACTGAATTTGGTAGCATTGTGTGGAGCAATGGGCAGCACCTAGTTAGGAGCCCAGTTGCTTTTGCATGGTCAGATGATTCCTGA	2322	0.5594	MASISFSFVILLKLVLVLLVPCCVPQSAIAIATKKTYIVHMKQHRNPTMYPTHEDWYTATLQYHNSHSDSLLYSYTTAYNGFAASLNTHQAQLLRASNSVLGVYEDTLYTLHTTRTPQFLGLETASNLWEGHTIQELDHASRDIIIGVLDTGVWPETKSFDDSHMSPIPTRWRGQCESASDFDPSLCNKKLIGARSFARGYLLASGGGYMLKAKEEVSPRDRDGHGTHTATTAAGSAVANATLLGYATGTAHGMAPQARVASYKVCWTGGCFASDILAGMDQAIQDGVDVLSLSLGGSSVAYHRDTIAIGAFAAVQRGIFVSCSAGNSGPRRGSLANVAPWIMTVGAGTLDRDFPAYVSIGNGKRFGGVSLYGGEGMGEKPVGLIYFNERSNSSSSVCMPGSLEPALVRGKVVVCDRGLNARAEKSAVVRDAGGVGMILANTAASGEELVADSHLLPAVAVGRSAGDQIKEYTSSDPNPTAVLSFGGTVLNVRPSPVVAAFSSRGPNGVTAQILKPDIIGPGVNILAGWSEAIGPSGLSQDTRKTQFNIMSGTSMSCPHISGLAALLKAAHPDWSPSAIKSALMTSAYTHDNTNSPLKDAAGEALSTPWAHGAGYVNPQKAFSPGLVYDATTQDYIAFLCSLDYTPDQVQLIVKSANVNCSVKFDDPGQLNYPSFSVVFGSKGVVRYTRTLTNVGAAGSVFDVDVSGPSLVEITVNPTRLVFGQVGERQSYTVTFVSNKGVDDSFRTEFGSIVWSNGQHLVRSPVAFAWSDDS*	774

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dod05g2416	773	Gene3D	Peptidase S8 propeptide/proteinase inhibitor I9	26	112	IPR037045	-
	Dod05g2416	773	ProSiteProfiles	Serine proteases, subtilase domain profile.	119	622	-	-
	Dod05g2416	773	CDD	Peptidases_S8_3	109	588	IPR034197	-
	Dod05g2416	773	Gene3D	-	351	490	-	-
	Dod05g2416	773	PANTHER	CUCUMISIN-RELATED	26	770	-	-
	Dod05g2416	773	Pfam	PA domain	406	469	IPR003137	-
	Dod05g2416	773	Gene3D	Peptidase S8/S53 domain	143	635	IPR036852	GO:0004252\|GO:0006508
	Dod05g2416	773	PRINTS	Subtilisin serine protease family (S8) signature	141	160	IPR015500	-
	Dod05g2416	773	PRINTS	Subtilisin serine protease family (S8) signature	551	567	IPR015500	-
	Dod05g2416	773	PRINTS	Subtilisin serine protease family (S8) signature	221	234	IPR015500	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Dod05g2416	Dod-Chr5	50464675	50467593	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dod05g2416	34	770	Subtilisin-like Serine Gene Family	AT2G05920	67.615	0.0	1025

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Dod05g2416	-		-	adu:107457896	1232.62

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Dod05g2416	05	50464675	50467593	Dod03g1579	03	21627872	21631384	PCT

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