Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2415 ATGAAATTCACATTGAGGTCGTTGCTTTCAAGTTGTTACAAGGTTGCTGATAACCCTTCCTCGCCCACCAAGCCCAACAAAGTTGTGGCAACAAAGAATAATAGTACTTCTAACAGGATCTCTGTGACTGATTTGAGTTATCCAAGCACAACCCTCTCGGAGGATATCTCTATATCTCTAGCAGGGTCTAACCTGCACGTGTTCTCACTTGCTGAGCTCAAGATTATCACTCAGAGCTTCTCTTCTAGTAACTTCCTAGGGGAAGGAGGGTTCGGGCCCGTGCACAAGGGTTTCATTGATGACAAGCTAAGGCCTGGTCTCATCAAGGCTCAGCCTGTGGCCGTTAAGCTCTTGGACTTGGATGGCTCTCAGGGTCATAAGGAGTGGTTGACTGAAGTTGTGTTTCTGGGTCAACTGAGGCATCCACAGCTTGTGAAACTGATTGGTTATTGCTGTGAAGAAGAACATAGGCTTCTGGTGTATGAGTATTTACCACGAGGCAGCTTAGAGAATCAACTTTTTAGAAGATATTCAGCATCATTGCCATGGTCAACAAGAATGAAAATTGCAGTTGGAGCAGCAAAGGGTCTATCCTTCCTGCATGAACAAAAGAAACCAGTCATCTATAGAGATTTCAAGGCTTCAAACATCTTGTTAGACTCTGATTACAATGCAAAGCTTTCTGATTTTGGCTTGGCAAAAGATGGTCCTGAAGGAGATGACACACACGTCTCTACTAGAGTTATGGGCACCCAAGGCTATGCTGCCCCAGAATATGTCATGACAGGTCACTTGACAGCAATGAGTGATGTGTACAGCTTTGGAGTGGTGCTATTGGAGCTGTTAACAGGAAGGAGGTCAGTGGATAAGGGACGCCCTGCAAGAGAGCAGAACCTAGTGGAATGGGCCAGGCCTATCCTCAATGATTCCCGGAAGCTTGGCAGGATAATGGATCCAAGGCTTGAGGGCCAGTATTCTGAGATGGGGGCAAAGAAAGCGGCTGCATTGGCTTATCAGTGCCTCAGCCAGAGGCCAAAGAGCAGGCCTACAATGGCCACAGTTGTTAAGACCCTTGAGCCACTCCAGGACTATGATGATATTCCAATTGGACCCTTTGTTTACACAGTCCCTCCTGATCAGTGTAATAACGAAGTGCAAAATAAAGAGAGTGAGACTCATAGGGAGAGGAAGAGGGAAAATAATGGTCACCATCACAGGAGTCACCATCGCAGCAACAATGGCCGTAGGCATCATCCACTGAAATCCCCCAAGTCATCACCAGAGTCACATAATGATAATAAACACCAAAATCATCGCAGCAGAAGTGGGTCAAATTCATCAGATGACACCTCCAATGCATCATCAAAAAGGCAAGAAGAAAGCATTGCTTAA 1392 0.4598 MKFTLRSLLSSCYKVADNPSSPTKPNKVVATKNNSTSNRISVTDLSYPSTTLSEDISISLAGSNLHVFSLAELKIITQSFSSSNFLGEGGFGPVHKGFIDDKLRPGLIKAQPVAVKLLDLDGSQGHKEWLTEVVFLGQLRHPQLVKLIGYCCEEEHRLLVYEYLPRGSLENQLFRRYSASLPWSTRMKIAVGAAKGLSFLHEQKKPVIYRDFKASNILLDSDYNAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHLTAMSDVYSFGVVLLELLTGRRSVDKGRPAREQNLVEWARPILNDSRKLGRIMDPRLEGQYSEMGAKKAAALAYQCLSQRPKSRPTMATVVKTLEPLQDYDDIPIGPFVYTVPPDQCNNEVQNKESETHRERKRENNGHHHRSHHRSNNGRRHHPLKSPKSSPESHNDNKHQNHRSRSGSNSSDDTSNASSKRQEESIA* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2415 463 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 28 417 - -
Dod05g2415 463 SUPERFAMILY Protein kinase-like (PK-like) 55 360 IPR011009 -
Dod05g2415 463 PANTHER OS01G0588500 PROTEIN-RELATED 28 417 - -
Dod05g2415 463 MobiDBLite consensus disorder prediction 421 442 - -
Dod05g2415 463 Gene3D Phosphorylase Kinase; domain 1 42 163 - -
Dod05g2415 463 MobiDBLite consensus disorder prediction 375 463 - -
Dod05g2415 463 CDD STKc_IRAK 86 361 - -
Dod05g2415 463 ProSitePatterns Serine/Threonine protein kinases active-site signature. 207 219 IPR008271 GO:0004672|GO:0006468
Dod05g2415 463 MobiDBLite consensus disorder prediction 399 420 - -
Dod05g2415 463 Gene3D Transferase(Phosphotransferase) domain 1 164 367 - -
Dod05g2415 463 ProSiteProfiles Protein kinase domain profile. 80 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g2415 463 MobiDBLite consensus disorder prediction 443 463 - -
Dod05g2415 463 Pfam Protein tyrosine and serine/threonine kinase 84 358 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g2415 Dod-Chr5 50447002 50449678 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g2415 66 398 Glycoside Hydrolase AT3G07070 50.298 2.28e-104 315
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Dod05g2415 PK_Tyr_Ser-Thr 1.8e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2415 - - gmx:100799411 711.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g2415 05 50447002 50449678 Dod03g1578 03 21555201 21558549 PCT