Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2409 ATGCCTTGTTCCATTTCCATGTCATCATCATCAGGTAGCACAATTCAAACACCAGAATTCCAGAGTTTGTTCTTCCGAGGTTGTCCCACTCGTTGCAAATGCCGAGGAATCTCTGCTTCTTGGGCCACGGCAATGGATTCGAATTTTTCTCCAATGATGAATAGTAACAAGAAGAAGAAGGAACTCTCGGTGCAGCTTCCGAGTTCAACACCACCCATCCCAAAGTTCGAAACTTTAAGGTTCTGCGATCTCCATTTTGATCGGTTGCAGCCATCGGAACAAGAATTGGATCAGCATAATAGGTTTGAGTTTGGCCAATTTGTTGCACGACAAGCCCTGCTTGATGAAGAGTATTGGACAGCAGCATGGCTGAGGGCAGAAAGTCATTGGGAGAATCGAACATTTGAACGTTATACTGATCATTACAAAAGGAAATTTGCGGATCAGGAATTTAATGCGATAAAAAGGCGGTCCAAGGTACAAAACGGGGAGAGTTGCACATGCATTATCACGGTGAGGAAGAAGCAGAAGAATGTAAAACGCTCAATATTGAGAAGTGTTGTAGGGACCCTTGATTTGAATATCCGATACTTGCTTCAAGGAGAGACCTTTCCTGGGGAAAGAGTGAAGGCTCCTCCATTTTGCAGCATCAACAGAACACCATCAAGCAGATATGGCTACATTGCAAACTTATGTGTTGCCAAATCAGCACGCCGCCAGGGTGTTGCAAGCAACATGGTGTATTTTGCTGTTGAATCTGCAAGATCTATAGCAGGTGTAGCACGTATATTTGCACATGTGGACAGAAATAACAGACCTGCACAGTTATTTTACCAGAACATGGGCTTTGAGATGGTTGAAATGGCAAACTCTCTGTTGTTAAGTGAGCAAACATACTTACTTCGTTTACAGACGTAA 918 0.4346 MPCSISMSSSSGSTIQTPEFQSLFFRGCPTRCKCRGISASWATAMDSNFSPMMNSNKKKKELSVQLPSSTPPIPKFETLRFCDLHFDRLQPSEQELDQHNRFEFGQFVARQALLDEEYWTAAWLRAESHWENRTFERYTDHYKRKFADQEFNAIKRRSKVQNGESCTCIITVRKKQKNVKRSILRSVVGTLDLNIRYLLQGETFPGERVKAPPFCSINRTPSSRYGYIANLCVAKSARRQGVASNMVYFAVESARSIAGVARIFAHVDRNNRPAQLFYQNMGFEMVEMANSLLLSEQTYLLRLQT* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2409 305 Gene3D - 109 305 - -
Dod05g2409 305 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 214 305 IPR000182 GO:0016407
Dod05g2409 305 CDD NAT_SF 214 266 - -
Dod05g2409 305 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 14 305 - -
Dod05g2409 305 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 14 305 - -
Dod05g2409 305 Pfam Acetyltransferase (GNAT) family 163 283 IPR000182 GO:0016407
Dod05g2409 305 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 188 287 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g2409 Dod-Chr5 50364215 50367087 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Dod05g2409 Acetyltransf_1 1.1e-11 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2409 - - adu:107457848 519.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g2409 05 50364215 50367087 Dod03g1571 03 21462228 21464912 PCT