Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2391 ATGTCGGTGAATCTCACGGCGAACGCGATCCCGGCGATCATCGCCGGCGACACGAACTCGAAGCCGCTAGTGCAAGTTCTCGATATCAAGCTAATTTCGAACAGCAAGCAGCAGGAGAGGTACCGGGTTTTGCTCTCCGATGCGGTTTCATCTCAGCACGCTATGCTCGCGACTCAGCTCAACGACCGAGTCCGAACCGGACGAGTTAAGAAAGGTTCCGTCGTTCAGCTGATCGAGTACATTTGCAGTCCTATTCAGAACCGCATGATTGTTGTGGTGCTGAACATGGAAACTATAATACCAGATTACGACATCATTGGAAATCCAAAGTCATTTGTGCAATCTGATATACCAATCCAGGGAGCGTTACCTAATAACAATAAGCAAAACTTATCGAAGAGTAATAATTATCATCGGCCAGCAACATCCAATGTGCAGAATTTCCGGCCACCTATTCAACCTCCATACCAACCACCCCCAGTTTACGAAAGCCATGGATTTAGATACTAA 510 0.4725 MSVNLTANAIPAIIAGDTNSKPLVQVLDIKLISNSKQQERYRVLLSDAVSSQHAMLATQLNDRVRTGRVKKGSVVQLIEYICSPIQNRMIVVVLNMETIIPDYDIIGNPKSFVQSDIPIQGALPNNNKQNLSKSNNYHRPATSNVQNFRPPIQPPYQPPPVYESHGFRY* 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2391 169 MobiDBLite consensus disorder prediction 123 169 - -
Dod05g2391 169 SUPERFAMILY Nucleic acid-binding proteins 1 108 IPR012340 -
Dod05g2391 169 PANTHER REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT A 2 109 - -
Dod05g2391 169 MobiDBLite consensus disorder prediction 123 150 - -
Dod05g2391 169 CDD RPA1N 9 100 IPR007199 GO:0003677|GO:0005634|GO:0006260
Dod05g2391 169 PANTHER REPLICATION FACTOR A 1, RFA1 2 109 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Dod05g2391 169 Pfam Replication factor-A protein 1, N-terminal domain 5 99 IPR007199 GO:0003677|GO:0005634|GO:0006260
Dod05g2391 169 Gene3D - 3 113 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g2391 Dod-Chr5 50167905 50176759 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g2391 26 166 Core DNA Replication Machinery Family AT2G06510 47.205 4.54e-40 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2391 K07466 - zju:107409151 209.149
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g2391 05 50167905 50176759 Dod05g2391 05 50167905 50176759 ECH