Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2385 ATGCTGACATGCATAGCACGTCCCAAGAAACCGGGCAACGACTCACTGAGTAAGCCGGACGATTCCGATCCCAACAACGCAACAAAAAACCAATCCATCAAATCCCTCACTTCTCAGATAAAGGACATGGCGCTGAAGGCGTCGGGGGCGTACAAGCATTGCGCTCCGTGTACGGGGCCGGCGGCGGCGCAGGGTGGAGTGAGGAGCACGGCGGAGTCATCGTCAGAGACAGATTCGGAGCGGTTCCGGTGGTCGTACCGGAGAACGGGAAGCTCGAGCTCGAGAGCTTGGGGGAAGGAAATGGAAGCGAGGCTGAAGGGGATATCGTCGGCGTCGAGTGGGGAAGGTACACCAAACTCCGCCAGCGGACGCCGTGGGGAGCCGGTGGTTCTGTTCGTGGAAGAGAACGAGCCCAAAGAGTGGGTGGCGCACGTGGAGCCCGGCGTTTTGATCACCTTCGTGTCTCTGCCACGTGGCGGCAACGATCTCAAGCGCATACGCTTTAGTCGGGAGATGTTTAACAAATGGCAAGCTCAAAGGTGGTGGGCAGAGAACTATGACAGGGTCATGGAACTTTACAATGTTCAAAGGCTTAACCGCCAAGCATTCCCTCTTCCAACGCCACCGAGGTCTGAAGATGAGAGCTCAAAGCTTGAATCAGCAGAAGAGAGCCCTGCCACACCTCAACTAACCAAGGAACGATTACCTCGTAATTTGCACCGTCCAACAGGAATGGGAATGGGATACTCATCCTCAGATTCCTTCGATCATCAATCAATGCAATCCCGGCAATTCTATGACTCAAACGGCGTGAACTCAACCCCAAAAATCTCCACCATTAGTGCGGCCTAA 852 0.5481 MLTCIARPKKPGNDSLSKPDDSDPNNATKNQSIKSLTSQIKDMALKASGAYKHCAPCTGPAAAQGGVRSTAESSSETDSERFRWSYRRTGSSSSRAWGKEMEARLKGISSASSGEGTPNSASGRRGEPVVLFVEENEPKEWVAHVEPGVLITFVSLPRGGNDLKRIRFSREMFNKWQAQRWWAENYDRVMELYNVQRLNRQAFPLPTPPRSEDESSKLESAEESPATPQLTKERLPRNLHRPTGMGMGYSSSDSFDHQSMQSRQFYDSNGVNSTPKISTISAA* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2385 283 PANTHER PROTEIN BREVIS RADIX-LIKE 4 1 283 - -
Dod05g2385 283 MobiDBLite consensus disorder prediction 18 39 - -
Dod05g2385 283 ProSiteProfiles BRX domain profile. 139 194 IPR013591 -
Dod05g2385 283 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 283 IPR044532 -
Dod05g2385 283 Pfam Transcription factor regulating root and shoot growth via Pin3 139 193 IPR013591 -
Dod05g2385 283 MobiDBLite consensus disorder prediction 245 283 - -
Dod05g2385 283 Pfam Transcription factor BRX N-terminal domain 25 57 IPR027988 -
Dod05g2385 283 MobiDBLite consensus disorder prediction 1 39 - -
Dod05g2385 283 MobiDBLite consensus disorder prediction 55 83 - -
Dod05g2385 283 MobiDBLite consensus disorder prediction 202 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g2385 Dod-Chr5 50145733 50149381 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g2385 1 244 Major Intrinsic Protein MIP AT1G31880 44.747 4.56e-57 185
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2385 - - gmx:100794109 469.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g2385 05 50145733 50149381 Dod05g2385 05 50145733 50149381 ECH
Dod05g2385 05 50145733 50149381 Dod03g1549 03 21119367 21128272 PCT