Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2378 ATGGTTTGGTTTCAATGCGAAGATTGTGGAGACAACCTCAAAAAGCCCAAGCTGCAGAGTCACTTCCGAACCTGCTTAGCTTACAAGTTATCATGCATTGACTGTGGACAAATATTTGGGCGTGACACCGTTCAGGACCACACTCAATGTATTACGGAAGCGGAAAAGTATGGTCCAAAAGGCCAAGGGAACAACGGTACAACTCCCAAGCCTAGCAAGGATAGCAACAAGCAAAGGCCTGAAGTTGATATTAATGTTGGGCTATCTGAACGGCCTCCATGGTTTTGCAGTCTTTGCAATACACAAGCTACAAGCAAGCAAACGCTTCTTCTCCATGCTGATGGAAAGAAACATAGGGCTAAGGCTCGGGCATTCCATGCTTCAAAGCAACGACCAGCCCAGACAGATATATCTGCCCCTGATGCAAAGATTGCCGAGGAGACTGCTCCTCATAATGAGGCTAGAGATAACAAAAATGCAGAGCAGCCAAAACTACAAGAGTCTTCTAAACAAAATCATTTGAAATCAGGCGATGAAATTTCTTCAGCTAAAAAGAGGAAACTTGAAGCATTGGATAATGATCTTGTTAAAAAAAGCAGGAATGACACTTCAGTTGACATGGGAAATGGGGAAGTAATTCAAGGTGAAGGAGCAGAAGCAGGAAGAAGGGGGAGCCATGTTAAAAGTAAAATAAAGTGGAAGAAGTTTATCAAATCAGCCCTGAAATCTCATCCTAATGGAGTTTTGAAGATGAAGAAACTGAAAAAAGCTGTCCTCAAAGCACTGCAGGAATCTGGCATTGTAGGGGATGAAACTGAATTGAGTGAGGCACTTCAGCAGAAGATAAATTCCAGCTCCAGATTTGCTGTTGAGAACAAGTATGTACGATTGGTGGCCAAAGACTGA 906 0.4305 MVWFQCEDCGDNLKKPKLQSHFRTCLAYKLSCIDCGQIFGRDTVQDHTQCITEAEKYGPKGQGNNGTTPKPSKDSNKQRPEVDINVGLSERPPWFCSLCNTQATSKQTLLLHADGKKHRAKARAFHASKQRPAQTDISAPDAKIAEETAPHNEARDNKNAEQPKLQESSKQNHLKSGDEISSAKKRKLEALDNDLVKKSRNDTSVDMGNGEVIQGEGAEAGRRGSHVKSKIKWKKFIKSALKSHPNGVLKMKKLKKAVLKALQESGIVGDETELSEALQQKINSSSRFAVENKYVRLVAKD* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2378 301 MobiDBLite consensus disorder prediction 146 163 - -
Dod05g2378 301 MobiDBLite consensus disorder prediction 120 185 - -
Dod05g2378 301 SMART ZnF_U1_5 91 125 IPR003604 GO:0003676|GO:0008270
Dod05g2378 301 Pfam LYAR-type C2HC zinc finger 30 57 IPR014898 -
Dod05g2378 301 ProSiteProfiles Zinc finger C2HC LYAR-type profile. 1 33 - -
Dod05g2378 301 SUPERFAMILY beta-beta-alpha zinc fingers 1 26 IPR036236 -
Dod05g2378 301 SUPERFAMILY beta-beta-alpha zinc fingers 81 127 IPR036236 -
Dod05g2378 301 MobiDBLite consensus disorder prediction 55 79 - -
Dod05g2378 301 MobiDBLite consensus disorder prediction 171 185 - -
Dod05g2378 301 Gene3D Classic Zinc Finger 88 130 - -
Dod05g2378 301 PANTHER CELL GROWTH-REGULATING NUCLEOLAR PROTEIN LYAR 1 298 IPR039999 GO:0003677
Dod05g2378 301 Pfam Zinc-finger of C2H2 type 94 118 - -
Dod05g2378 301 SUPERFAMILY beta-beta-alpha zinc fingers 30 58 IPR036236 -
Dod05g2378 301 Gene3D - 1 50 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g2378 69 143 C2H2 Transcription Factor Family AT2G19380 52.000 9.29e-18 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2378 K15263 - gmx:100790703 465.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g2378 05 50063780 50066431 Dod05g2378 05 50063780 50066431 ECH