Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dod05g2378 | ATGGTTTGGTTTCAATGCGAAGATTGTGGAGACAACCTCAAAAAGCCCAAGCTGCAGAGTCACTTCCGAACCTGCTTAGCTTACAAGTTATCATGCATTGACTGTGGACAAATATTTGGGCGTGACACCGTTCAGGACCACACTCAATGTATTACGGAAGCGGAAAAGTATGGTCCAAAAGGCCAAGGGAACAACGGTACAACTCCCAAGCCTAGCAAGGATAGCAACAAGCAAAGGCCTGAAGTTGATATTAATGTTGGGCTATCTGAACGGCCTCCATGGTTTTGCAGTCTTTGCAATACACAAGCTACAAGCAAGCAAACGCTTCTTCTCCATGCTGATGGAAAGAAACATAGGGCTAAGGCTCGGGCATTCCATGCTTCAAAGCAACGACCAGCCCAGACAGATATATCTGCCCCTGATGCAAAGATTGCCGAGGAGACTGCTCCTCATAATGAGGCTAGAGATAACAAAAATGCAGAGCAGCCAAAACTACAAGAGTCTTCTAAACAAAATCATTTGAAATCAGGCGATGAAATTTCTTCAGCTAAAAAGAGGAAACTTGAAGCATTGGATAATGATCTTGTTAAAAAAAGCAGGAATGACACTTCAGTTGACATGGGAAATGGGGAAGTAATTCAAGGTGAAGGAGCAGAAGCAGGAAGAAGGGGGAGCCATGTTAAAAGTAAAATAAAGTGGAAGAAGTTTATCAAATCAGCCCTGAAATCTCATCCTAATGGAGTTTTGAAGATGAAGAAACTGAAAAAAGCTGTCCTCAAAGCACTGCAGGAATCTGGCATTGTAGGGGATGAAACTGAATTGAGTGAGGCACTTCAGCAGAAGATAAATTCCAGCTCCAGATTTGCTGTTGAGAACAAGTATGTACGATTGGTGGCCAAAGACTGA | 906 | 0.4305 | MVWFQCEDCGDNLKKPKLQSHFRTCLAYKLSCIDCGQIFGRDTVQDHTQCITEAEKYGPKGQGNNGTTPKPSKDSNKQRPEVDINVGLSERPPWFCSLCNTQATSKQTLLLHADGKKHRAKARAFHASKQRPAQTDISAPDAKIAEETAPHNEARDNKNAEQPKLQESSKQNHLKSGDEISSAKKRKLEALDNDLVKKSRNDTSVDMGNGEVIQGEGAEAGRRGSHVKSKIKWKKFIKSALKSHPNGVLKMKKLKKAVLKALQESGIVGDETELSEALQQKINSSSRFAVENKYVRLVAKD* | 302 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dod05g2378 | 301 | MobiDBLite | consensus disorder prediction | 146 | 163 | - | - | |
Dod05g2378 | 301 | MobiDBLite | consensus disorder prediction | 120 | 185 | - | - | |
Dod05g2378 | 301 | SMART | ZnF_U1_5 | 91 | 125 | IPR003604 | GO:0003676|GO:0008270 | |
Dod05g2378 | 301 | Pfam | LYAR-type C2HC zinc finger | 30 | 57 | IPR014898 | - | |
Dod05g2378 | 301 | ProSiteProfiles | Zinc finger C2HC LYAR-type profile. | 1 | 33 | - | - | |
Dod05g2378 | 301 | SUPERFAMILY | beta-beta-alpha zinc fingers | 1 | 26 | IPR036236 | - | |
Dod05g2378 | 301 | SUPERFAMILY | beta-beta-alpha zinc fingers | 81 | 127 | IPR036236 | - | |
Dod05g2378 | 301 | MobiDBLite | consensus disorder prediction | 55 | 79 | - | - | |
Dod05g2378 | 301 | MobiDBLite | consensus disorder prediction | 171 | 185 | - | - | |
Dod05g2378 | 301 | Gene3D | Classic Zinc Finger | 88 | 130 | - | - | |
Dod05g2378 | 301 | PANTHER | CELL GROWTH-REGULATING NUCLEOLAR PROTEIN LYAR | 1 | 298 | IPR039999 | GO:0003677 | |
Dod05g2378 | 301 | Pfam | Zinc-finger of C2H2 type | 94 | 118 | - | - | |
Dod05g2378 | 301 | SUPERFAMILY | beta-beta-alpha zinc fingers | 30 | 58 | IPR036236 | - | |
Dod05g2378 | 301 | Gene3D | - | 1 | 50 | - | - |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Dod05g2378 | 69 | 143 | C2H2 Transcription Factor Family | AT2G19380 | 52.000 | 9.29e-18 | 81.6 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Dod05g2378 | K15263 | - | gmx:100790703 | 465.307 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Dod05g2378 | 05 | 50063780 | 50066431 | Dod05g2378 | 05 | 50063780 | 50066431 | ECH |