Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2373 ATGGAGGAAATATCTTCTAGTGTTGCAGTACCATTTACCCTTGGGAATTTGATTCAAAAGGAGTCTGCTGTGACAACCCACGTGGAGATAACTGGGATAAAGCTTATGGCAAATACAGCAGCAGCCTTAATACTAAATCCTGCGGTGGAAGGTAGCCAATCATACTCTGTTGGAAGTGAAAACCATTCAGATGTTAGTCTGAAACACCAAATCACAGTATCTGCAGAGGTGAAGGAGAATCGAGTTGGAGCTGCTGTTGTCTCAGAAATGGTTATTGAATGTGACAGTAATTGGTTATTGACAGAAAACCATAGCCAGGCAAGAAAGGAAGATGAATTCATGCTTGCTGTGGATTTTCAGTGTCTGCATAATTCAAGCTCTAACGACAAAAACAGCCCTTGTGGGGAGGAAGCTGCATCTTTGAACACTAATTATTCTGAAATAGATTCACCAATTATCATCAGCAGTGATGATGATATCCGTGGTAAGTATGGTTTAAATGAGTCACATCCAGCACTGCAGCTGGAGCAGAACATAGTTTCTGTTGCAATGGATCTTGAGAGTGAGGATCAAAGGGGATCAGATGGGTCTGATCCAAAACTATGTGCTGCACTTCTTGATCAGTTTCCAGGGGAGAAGAAAACATTGAGTAATGGTCCTCTCTGGGGCTTTTCATCAGTTTGTGGAAAGAGACCAGAGATGGAAGATGCTGTAGCTGTTAAGCCTCAACTTTTTCAAGTCCCTTCAGAGATGCAAATGGATGACCATATGAATGAAAGCACAAAATACTCATCAGCCCACTTTTTTGGTGTCTATGATGGACATGGTGGCTTTCAGGTTGCCAATTACTGCCGGGAACGTCTACATTCAGCATTGATTGAGGAGATAGAAGCTGCACAAGTAAGTTTGGCTGAAACAAATGTGGAGGACAATCGGCAGGACCATTGGAACAAAGCATTTGTAAATTGTTTTCAGAAAGTAGATGATGAAGTTGGAGGAATTCTTTCAGGTAATAGTGGAAATAACAGTGGTGGACCTGAGCCTAACATTGAACCTCTTGCTCCTGAGACTGCTGGCTCCACTGCAGTGGCTCCTCAAGCATCCAAGCTCATTCAGAATGACCTCTAA 1128 0.4264 MEEISSSVAVPFTLGNLIQKESAVTTHVEITGIKLMANTAAALILNPAVEGSQSYSVGSENHSDVSLKHQITVSAEVKENRVGAAVVSEMVIECDSNWLLTENHSQARKEDEFMLAVDFQCLHNSSSNDKNSPCGEEAASLNTNYSEIDSPIIISSDDDIRGKYGLNESHPALQLEQNIVSVAMDLESEDQRGSDGSDPKLCAALLDQFPGEKKTLSNGPLWGFSSVCGKRPEMEDAVAVKPQLFQVPSEMQMDDHMNESTKYSSAHFFGVYDGHGGFQVANYCRERLHSALIEEIEAAQVSLAETNVEDNRQDHWNKAFVNCFQKVDDEVGGILSGNSGNNSGGPEPNIEPLAPETAGSTAVAPQASKLIQNDL* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2373 375 MobiDBLite consensus disorder prediction 334 375 - -
Dod05g2373 375 PANTHER PROTEIN PHOSPHATASE 2C ABI2-LIKE PROTEIN 116 364 - -
Dod05g2373 375 Pfam Protein phosphatase 2C 249 311 IPR001932 -
Dod05g2373 375 MobiDBLite consensus disorder prediction 361 375 - -
Dod05g2373 375 Gene3D - 213 365 IPR036457 -
Dod05g2373 375 PANTHER ALPHABET, ISOFORM E-RELATED 116 364 - -
Dod05g2373 375 ProSitePatterns PPM-type phosphatase domain signature. 268 276 IPR000222 GO:0043169
Dod05g2373 375 SUPERFAMILY PP2C-like 219 363 IPR036457 -
Dod05g2373 375 ProSiteProfiles PPM-type phosphatase domain profile. 221 375 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g2373 Dod-Chr5 50043472 50047373 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g2373 220 364 PP2C-type Phosphatase Gene Family AT1G17550 50.340 2.28e-42 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2373 K14497 - gmx:100789207 423.705
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g2373 05 50043472 50047373 Dod05g2373 05 50043472 50047373 ECH
Dod05g2373 05 50043472 50047373 Dod03g1534 03 20898783 20902366 PCT