Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2368 ATGTCCAACTTCGCCCTCGCCGGCGCCGAAATGAGATCGGTTGCCGTCGCCGTCAGCGGTGGCTCCGGCGCAGGAAGGGGCAGCCGGCGAGCCGTGCAGTGGGCGGTGAAGCATCTCGTCCCTCAAGCTGATAGGTTCATCTTAGTCCACGTCATCCCCAAAATTACTTCAATTACAAGCCCTTCTGGAGAGTGTGTTCCTATTTCGGAAGCAGATGCAGATGTCTTTGCAGCTTATGTGCAGGATGTGAAACAAAAGTCTGAACAAATCTTTGTTCCATTCAAGAAACTATGCGACATAGACACAATGGAAACCGTGCTGCTAGAAGATGACAACCCCGCCAATGCAATTCTTAGCTTTATCTCCGAGTCTGGCATCCAAATATTAGTGATGGGTTCTGACTCCTCAAATTTCATTACAAGGAAATTAAAAGGACCAGGGATATCGGCAACGGTTCTTAAATGCACTCCCGAGAGCTGTGATGTATATCTTGTAGCTAGAGATAGAATTATGTCGAAGTTAGCTGATTCTTCATCTTCAATTTCTCATGAGACTAGATCAAGGTACTCCATGTCGATGCAAGTAAATGAAGGAGACAGTGGTGATGGAATTGGTGGGGAAATGTATGGAAGTAATTATTCCCATGTGGATCGTAGAATTCTAAAAAATTTCAGATTTTTATCAATATCAGAACGTTGTTACATTGGTCTACAAACAGTCAGTCGTCGGGATTCTTTCGAAAATTCTACCATTGATGATTTTGAAACGATTAGCCTCCACCCATTTGACTCCATATCTTCTGCACAGCGTGAACAGTTAGCCATGCAAGAAGAAGTGGAAAGGGTGCAGCTGGAGTTGCAGAATACTGTTGCCATGTACAAACAGGTTTGTGAAGAACTGGCTGATGTTCAAAACAAGGCTTTTTTACTTTCTTCAGAATCTCTTGAAGAAGCTAAAAGAGTTGATGCTTCCCTGAAAAGGGAGGAGATTTTGAGAAAGATTGCTGCTGAAGAGAAAGAAAAGTATTTAAAAGTCACGAAGGAACTTGAGGAGGCAAAAAAGGTGCTTGCCCAAGAGTCATATGAAAGACAGATGGCTGAACTTGATGTCATTAAAGAATCCATAGAAAAAAAGAGAATAGTTGACACATTGCTCTCAAGTGACAGGAGATACAGAAAGTACACTATGGATGAAATCAAGGTAGCAACAAACTTCTTCTCTGAGGACTTGATGATTGGTGAAGGAGGGTATGGGAAAGTCTACAAGTGCAATCTGGATCACACACCAGTAGCTGTTAAGGTTCTGCATCCAGATGCAAGGAACAGTAAAGAGGAGTTCCTGAATGAGGTTGAGATTCTTAGTCAACTACACCATCCAAATATGGTTTTGTTACTTGGAGCATGCCCTGACACTGGTTGCCTTGTTTATGAATACCTGGAAAACGGAAGCCTAGACGACTACATTTTCAACAAAAAAAATGGGAAACAGCCACTTCCTTGGTTTATTCGATTCCGCATAGTTTTCGAGATGGCCTGTGGGCTCTCATTCTTGCATAATGCAAAGCCAGAGCCTATTGTTCATCGAGATATCAAACCTGGCAATATCTTGTTAGACAGAAATTATGTGAGCAAAATTGCCGATGTTGGGCTGGCTAAACTCCTTTCAGATGTTGTGCCCGACAATGTCACAGAGTACAGAGAATCCGTGCTTGCTGGTACTCTGCATTACATGGATCCAGAGTATCAGAGAACTGGCACTGTCCGGCCGAAATCAGATGTATATGCTTTTGGAATCATAGCTCTCCAATTAATAACTGCTCGCAATGCACGTGGACTCATTCTAGCTGTTGAAGATGCAGTTAAAAAGGGCTCCCTCTGCGATATTTTAGATAAATCAGCCGGTGATTGGCCACTGAATGAGACATGGGAATTGACCCAAATTGCCCTTAAATGTGTTGCACTCAGATGCAGAGATAGACCAGAACTTGATACTGAAGTTCTTCCACTGCTTGAAAGACTTTCTGATGTGTCAGATGCAAGTGCAAGGATAGGAAGAAGAAATAGAATCGGCACGCCAAGCCAGTACTATTGTCCAATTCTTCAGGAAGTAATGGATGATCCACATATTGCTGCGGATGGTTTTAGTTATGAGTACAGAGCAATCAAGGCATGGCTCAGCAGACACAATGTGTCCCCCGTGACAAAGCTTAAACTCAAGCATTCTGTGTTGATTCCAAACCACACTTTACGTTCTGCCATTCAGGAGTGGAAGTCAGGAGTGTCCTCATTGGATTAG 2295 0.4318 MSNFALAGAEMRSVAVAVSGGSGAGRGSRRAVQWAVKHLVPQADRFILVHVIPKITSITSPSGECVPISEADADVFAAYVQDVKQKSEQIFVPFKKLCDIDTMETVLLEDDNPANAILSFISESGIQILVMGSDSSNFITRKLKGPGISATVLKCTPESCDVYLVARDRIMSKLADSSSSISHETRSRYSMSMQVNEGDSGDGIGGEMYGSNYSHVDRRILKNFRFLSISERCYIGLQTVSRRDSFENSTIDDFETISLHPFDSISSAQREQLAMQEEVERVQLELQNTVAMYKQVCEELADVQNKAFLLSSESLEEAKRVDASLKREEILRKIAAEEKEKYLKVTKELEEAKKVLAQESYERQMAELDVIKESIEKKRIVDTLLSSDRRYRKYTMDEIKVATNFFSEDLMIGEGGYGKVYKCNLDHTPVAVKVLHPDARNSKEEFLNEVEILSQLHHPNMVLLLGACPDTGCLVYEYLENGSLDDYIFNKKNGKQPLPWFIRFRIVFEMACGLSFLHNAKPEPIVHRDIKPGNILLDRNYVSKIADVGLAKLLSDVVPDNVTEYRESVLAGTLHYMDPEYQRTGTVRPKSDVYAFGIIALQLITARNARGLILAVEDAVKKGSLCDILDKSAGDWPLNETWELTQIALKCVALRCRDRPELDTEVLPLLERLSDVSDASARIGRRNRIGTPSQYYCPILQEVMDDPHIAADGFSYEYRAIKAWLSRHNVSPVTKLKLKHSVLIPNHTLRSAIQEWKSGVSSLD* 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2368 764 SMART Ubox_2 694 756 IPR003613 GO:0004842|GO:0016567
Dod05g2368 764 Gene3D Phosphorylase Kinase; domain 1 385 478 - -
Dod05g2368 764 CDD RING-Ubox_WDSUB1_like 695 735 - -
Dod05g2368 764 Pfam Protein tyrosine and serine/threonine kinase 411 663 IPR001245 GO:0004672|GO:0006468
Dod05g2368 764 Gene3D Transferase(Phosphotransferase) domain 1 479 687 - -
Dod05g2368 764 SMART serkin_6 406 670 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g2368 764 PANTHER OS02G0152300 PROTEIN 13 759 - -
Dod05g2368 764 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 11 166 - -
Dod05g2368 764 Coils Coil 265 285 - -
Dod05g2368 764 SUPERFAMILY RING/U-box 690 757 - -
Dod05g2368 764 Coils Coil 335 378 - -
Dod05g2368 764 SUPERFAMILY Protein kinase-like (PK-like) 388 662 IPR011009 -
Dod05g2368 764 ProSitePatterns Protein kinases ATP-binding region signature. 412 433 IPR017441 GO:0005524
Dod05g2368 764 Gene3D HUPs 11 165 IPR014729 -
Dod05g2368 764 ProSiteProfiles U-box domain profile. 690 763 IPR003613 GO:0004842|GO:0016567
Dod05g2368 764 ProSitePatterns Serine/Threonine protein kinases active-site signature. 525 537 IPR008271 GO:0004672|GO:0006468
Dod05g2368 764 Pfam U-box domain 692 757 IPR003613 GO:0004842|GO:0016567
Dod05g2368 764 ProSiteProfiles Protein kinase domain profile. 406 696 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g2368 764 CDD STK_N 13 167 - -
Dod05g2368 764 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 34 13 759 - -
Dod05g2368 764 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 690 761 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g2368 Dod-Chr5 50005139 50010218 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g2368 1 758 Plant U-box Gene Family AT5G57035 52.174 0.0 798
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Dod05g2368 PK_Tyr_Ser-Thr 1.6e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2368 - - gmx:100805896 1160.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g2368 05 50005139 50010218 Dod05g2368 05 50005139 50010218 ECH