Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2362 ATGGAACCTCGTGTTGGTAATAAGTTTCGGCTGGGCCGGAAGATCGGTAGCGGTTCCTTTGGGGAGATCTATTTAGGTACTAATATTCAAACTAACGAGGAGGTTGCAATTAAGCTTGAAAGTGTCAAGACAAAGCATCCGCAGTTGCTGTACGAGTCCAAGCTATACAGAATTTTACAGGGAGGAACTGGAATTCCAAATGTTAGATGGTTTGGAGTGGAGGGAGATTACAATGTTCTAGTGATGGATCTGCTTGGACCTAGTCTTGAAGATCTATTTAACTTCTGTAGTAGAAAACTATCACTAAAGACAGTTCTCATGCTTGCTGATCAAATGATCAACCGCGTTGAGTTTATTCATTCTAAATCATTTCTACATCGGGATATTAAACCAGATAATTTTCTGATGGGCTTAGGAAGACGTGCGAACCAGGTTTATGCTATTGATTTTGGTTTGGCTAAGAAATACAGAGATAGTTCAACCCATCAACACATTCCTTACAGGGAAAATAAGAATTTGACTGGAACTGCAAGATATGCTAGTATGAATACTCACCTTGGCATTGAGCAAAGTCGAAGAGATGACTTGGAGTCTCTTGGTTATGTTTTGATGTACTTCCTGAGAGGAAGTCTTCCCTGGCAGGGACTTAAAGCGGGAACCAAGAAACAGAAGTATGAGAAAATCAGTGAGAAAAAGGTTTCTACTACAATTGAAGCCTTGTGTCGAGGCTATCCAACAGAATTTGCATCATACTTCCACTATTGCCGCTCATTGAGGTTTGATGATAAGCCAGACTATGCTTACCTCAAAAGGATATTTCGTGACTTGTTTATTCGTGAAGGATTCCAATTTGATTATGTGTTTGACTGGACCATCTTGAAGTATCAGCAATCACAGCTTGCCACTCCTCCAGCACGTGCCATTGGTCCTAGTGCTGGAACCAGTTCTGGACTGCCACCGGCAGTCACCAATGCTGATAGACTGACAGGAGCGGAAGAAGGGCGGCCTCCTGGTTTGGTTTCAGTGGATTCTTCAAGGCGAAGAATGTCAGGGCCCATTTTAAATTCTTTATCAACTGCCAATATCTTGGGCCAATCCAGTGGATCATCAAGGCGGGTTGCTGTTTCTAGTAGCCGTGATGCATTTGTTGGTGCTGAGTCAGATGTTCGTGCTCGAACTGCTGAGGCTAGCCCTGGAGCAGCACACAGAATAACAAGTGGGCAAAGAAGTTCCCCAGTTGGATCCTCTGATCCCAGGAGAGTAGCATCGTCTGGGAGAACTGCTTCTCATGCCAGGAATTACGACTCTGCAGTGAGAGGCATGGAGAGTCTGCAGTTAGAGAATGATGAGAGGGCCCATTATTAA 1365 0.4396 MEPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLESVKTKHPQLLYESKLYRILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFIHSKSFLHRDIKPDNFLMGLGRRANQVYAIDFGLAKKYRDSSTHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTTIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRIFRDLFIREGFQFDYVFDWTILKYQQSQLATPPARAIGPSAGTSSGLPPAVTNADRLTGAEEGRPPGLVSVDSSRRRMSGPILNSLSTANILGQSSGSSRRVAVSSSRDAFVGAESDVRARTAEASPGAAHRITSGQRSSPVGSSDPRRVASSGRTASHARNYDSAVRGMESLQLENDERAHY* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2362 454 Pfam Protein kinase domain 10 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g2362 454 MobiDBLite consensus disorder prediction 304 346 - -
Dod05g2362 454 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Dod05g2362 454 SMART serkin_6 9 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g2362 454 Gene3D Transferase(Phosphotransferase) domain 1 1 308 - -
Dod05g2362 454 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Dod05g2362 454 SUPERFAMILY Protein kinase-like (PK-like) 5 290 IPR011009 -
Dod05g2362 454 MobiDBLite consensus disorder prediction 403 431 - -
Dod05g2362 454 ProSiteProfiles Protein kinase domain profile. 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g2362 454 MobiDBLite consensus disorder prediction 389 454 - -
Dod05g2362 454 PANTHER CASEIN KINASE I-LIKE 1 433 - -
Dod05g2362 454 CDD STKc_CK1_delta_epsilon 8 282 - -
Dod05g2362 454 PANTHER CASEIN KINASE-RELATED 1 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g2362 Dod-Chr5 49945548 49950507 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g2362 7 223 EF-hand Containing Proteins AT2G17890 26.667 1.27e-13 70.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Dod05g2362 Pkinase 1.5e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2362 K02218 - gmx:100785851 847.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g2362 05 49945548 49950507 Dod05g2362 05 49945548 49950507 ECH
Dod05g2362 05 49945548 49950507 Dod03g1522 03 20747458 20757284 PCT