Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2360 ATGGTGGTTGCTCACGGTGGTGGCTGCGGTGAAAGCGGTGGCGGCTGCTCTCGCTTATCGTCGCCGTCGACGAATAGAACTGCGGTCGTGGTGGAAGAAGGAGAAGAAGTAGCGAGAGTCAAATCAGAGCAAGATGATGATCGAGACGACGACGTTTTCAGCGACGAGTCTGAGAGGAAGAACGACTCGGGAGTGACGGAAGAAGAGTGCGCCGTGGAAGCGGTTCGTGTGAAAGAAGAGCTTGCTGATGACGCTGCTGACGGTGCCGTTAATAACGGTTCGCCGTCTTCGTCTTCGATCGAGTTGCCGAAACCTATGGAAGGGTTGCACGAGGCGGGTCCGCCACCGTTCCTAAAGAAGACGTTCGAAATGGTGGAGGATGCTGAAACCGACGCGATTGTGTCGTGGAGCGAGACGCGCGACAGCTTCATCGTTTGGGATTCACACGAATTCTCCAAGGTGCTTCTCCCCAAATACTTCAAGCATAGCAATTTCTCCAGCTTCATTCGCCAGCTCAACACCTATGGGTTTAGGAAGGTTGATTCAGATCGTTGGGAGTTTGCAAATGAAGGATTCCAAGGAGGGAAGAAGCATTTGCTGAAGAACATAAGGAGGAGGAGCAAGTACAACAAACTGCATCAAGGAGCGTTCAATTCGATGAAGCCTGGCCTGGAGTCTGAAGTTGAGAAGTTGAAGAAGGATCAGAACATACTCAAGCTGGAAATTCTGAAGCTGAGACAACAGCAGGAGAGTTCAAATGTTCAGCTCACAAATGTTCAGGATCGGATTCGGTGTGCCGAGATGAAGCAGAATCAGATGATATATTTCCTCACAAAAATGGCCAGAAAGCCTACGTTTGTGGAGCAGCTTCTCCACACGATTAAGCGGAAAAGAGAACTTGATGGCACTGACATGCTTAAGAGACGCAGGTTGCTGGGAGCTCAGTGCCCTGTCACCTTCCCTAAGGCCATGGAACCAACCCCTAATAATGTTGATTACAAGCGCCAAGGTCATGAACAATTTGCTACATTGCAATCTGAGCTCAATGGACTATTGTCTGAAACTGTGAACATTAGCAGGATGGAGCCACCTACTCCTTTGGAAGATGAGTTATGTAGCACTGTGCAAGGCTTAAGGGCCTCCACTTATGTTCCTTCCCGAACTAGTGATGTTCCTTCTGCTTATCATGTTATGTCAGAGAAACTGCTGGGGGAAAATTCTGTTGCTGATGAGGAGCTAGATGTGAATGACTCGAATATTTATCTTGAGTTGGAGGATTTGATAACCAAGCCAACAGATTGGGTTGGATCTGCATCAGCAAGTGGCTTGGTGGGGCAAACCAATTGCATGTATTAA 1356 0.486 MVVAHGGGCGESGGGCSRLSSPSTNRTAVVVEEGEEVARVKSEQDDDRDDDVFSDESERKNDSGVTEEECAVEAVRVKEELADDAADGAVNNGSPSSSSIELPKPMEGLHEAGPPPFLKKTFEMVEDAETDAIVSWSETRDSFIVWDSHEFSKVLLPKYFKHSNFSSFIRQLNTYGFRKVDSDRWEFANEGFQGGKKHLLKNIRRRSKYNKLHQGAFNSMKPGLESEVEKLKKDQNILKLEILKLRQQQESSNVQLTNVQDRIRCAEMKQNQMIYFLTKMARKPTFVEQLLHTIKRKRELDGTDMLKRRRLLGAQCPVTFPKAMEPTPNNVDYKRQGHEQFATLQSELNGLLSETVNISRMEPPTPLEDELCSTVQGLRASTYVPSRTSDVPSAYHVMSEKLLGENSVADEELDVNDSNIYLELEDLITKPTDWVGSASASGLVGQTNCMY* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2360 451 MobiDBLite consensus disorder prediction 1 104 - -
Dod05g2360 451 Gene3D - 109 207 IPR036388 -
Dod05g2360 451 PRINTS Heat shock factor (HSF) domain signature 168 180 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dod05g2360 451 PRINTS Heat shock factor (HSF) domain signature 117 140 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dod05g2360 451 PRINTS Heat shock factor (HSF) domain signature 155 167 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dod05g2360 451 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 94 431 IPR027725 -
Dod05g2360 451 Coils Coil 228 248 - -
Dod05g2360 451 MobiDBLite consensus disorder prediction 32 85 - -
Dod05g2360 451 Pfam HSF-type DNA-binding 117 206 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dod05g2360 451 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-9 94 431 - -
Dod05g2360 451 SMART hsfneu3 113 206 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dod05g2360 451 SUPERFAMILY "Winged helix" DNA-binding domain 113 206 IPR036390 -
Dod05g2360 451 ProSitePatterns HSF-type DNA-binding domain signature. 156 180 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g2360 Dod-Chr5 49919177 49921508 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g2360 103 311 HSF AT2G26150 56.481 1.24e-81 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Dod05g2360 HSF_DNA-bind 3.1e-32 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2360 K09419 - gmx:100818430 574.704
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g2360 05 49919177 49921508 Dod05g2360 05 49919177 49921508 ECH