Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2343 ATGGTGGTGGTTTTGGCAATGATGCTGCAGCTGCTGAAGCTCTGCATCATTGGCTTTTTTGTGGAAGTCCAAAGATCCAAAGGGCTTGTTATATCTCCATCTGCACCAAACTTACCTGTGTATCCTTCCCCAAGTGATTCATGGACAGCCATTGCTCCAAGCTCTCCAGAAGTACCAAATGGTTCATTCTTGCACCCTCCAATTACATTACCACTTCCTGCATCAGCTCCAACTCCTCAGAAGCATAAAGACATTGAACCATACTCTTCTCCAAATCCAAGCCCTATAACATTGTCTCCACCATATGAGGTTGTTCCTTCACCATCAACACTGCAAGGGAATGTACCACCACCCTTAAAAGCAAGTCCACCTCAAAGGAAAGAACCTGCTATAGGGCCAACTACTCCAGCCCCAGCTGCAATACCTTCTGGCAGATCAGTAAATAATTCACCGGTCAGCCAACCAACTGAACATGGAACTTTGGCACCTAACATTGACAATAGGAATGCAAGTCAGAGACACACAGCGGAGCCAGTTTCGCCATCACCAGTTGCAGCACCTTTGACCCATTCGCCCAAAAATTCATCAGGCAGCCAACCAACTGAACATGGAAGTTTACCCCCTAAACAGGGTACAAACAAAGCCCCTGTAGCACTTAATTTGCCAAAACCTTCACCTGTAAGCCAGCCAACTGAACATGGAAGTTTGCCTCCAATTGCTCATCAGGGGAATGCAAATACCACTCACAACTTGAAGCCAGTTTCACCAGAATCGGCTGCATCCCCACCATGGAAAGTGGAATATAACCCACCAGTAGCCCACCCTCTTTTCCCAACAATGACTCCATCCGTATTGCCTGCGCCTGTTACACAACCAAGAAGTTCATTTCCAGCAAATCCACCACTGGTCCATCCTATTGTTCCTTCAGTATCTCCCTCAAAATTGCCAGCACATGTTGCCTCTCCAATGTCAACTCCTTCCAGAAGCTTCCCCTGGAAAAAAGGTGGAGCACCCCCAGTTGCTGCACCTTTGTACAAAACACCAAAGCCACTTCCAGCTGTTATACATACCCCTGCTCAAGCTCCTGCTGCACATAAAGCAAGACAATCAGATCATGCTCCTGAGCCATTGATGTCTCCTAAATCTCCTTCCAATAACGAATACCATTTCCCTGCATTTTCACCTTCACTCTCATCATATAATCATCATCATACAAGGAACACAATTTCCAGCCCTGCTCCTGCATCACCATACATGGTTTCTCCTCCTACTTCAAGCAATCAAGATCAAGCAACTCCTCCTTCATTACCACCAGCAAGTGGACAAAAATATTATGTTCCACCACCAATGAACCAAGGTTCTTCTGTTCCCCCATCCTCTTCCCCCATTGATTCAACCATGGGCAAAGTTTCACCGGCTCCTTCTCCATCAATCAGAATAGCTCCTCACCCAACCGAAATGCAAGTTCCATTCTCTCCTCCTAAAGCATCTCCTTCTGGCCCTAAGACACCACTCCTACCTCAAGTTCAAGCACTGCCACCCCCACCTCCTAATGAAGAATGTTTATCAACTGTCTGCATAGAGCCTTATACAAATTCTCCCCCTGGAGCACCATGCAGATGTGTTTGGCCCATGCGAGTTGGCCTTCGCCTTAGTGTTTCTCTTTATACCTTCTTCCCTTTGGTTTCAGAGCTGGCTTCTGAAATTGCCACAGGGGTTTTCATGAAGCAAAGTCAAGTTCGAATTATGGGAGCCAATGCAGCAAATGAGCAACCTGAGAAAACTGTTGTCTTTATTGATTTGGTACCACTTGGGGAAAACTTTGACGGTACTACAGCATTTTTTATTTCTGACAGATTTTGGCATAAAAAGGTTGTTATAAAAGCTTCCTACTTTGGAGACTATGATGTATTATATGTGAGCTATCCAGGTATGTATAAATTTCAGTTCTCTGTGTTCCCTCTTTACCATGACCCTTTTGGTGAGAATTTTTATGGGATCCTCCTGTATATAGGTTTACCTCCTTCTCCTCCTTTACCACCTTCTACCATTACCATGATTGATGGTGGCCCATATTCTGTTGGTGGGAATAATGGAGGAACAATAAAGCCTCTTGGGGTTGACATACAGAAGAGGCAACATAGAGTTGGACTTAACAGAGGCATAATTGCCATTATTGCAGTTTCAGTTTTTCTAGCATTTGTTTTATGCACCGCAGCTTCTTGGGTCTTGTTCAAGTTCAGAGATCATGTTAGTCAACCAGCATCAACCCCACGGATTTCACAACCTTCTCTAACAAAAGCACCAGGTGCTGCTGGTTCATCATTAACTGGAGGTGGGGTTGGTTCTGCTTCAACTTCATTTCGATCTAGTATTGCTGCTTATACAGGATCTGCTAAGACTTTCAGTGCGAATGACATTGAGAAAGCTACTGATAATTTTCATGCTTCTAGAATACTTGGAGAAGGTGGTTTTGGGCTTGTTTACAGTGGTATCCTTGAAGATGGAAAGAAAGTGGCGGTCAAGGTTCTAAAGAGGGAGGATCATCATGGTGTTCGTGAATTCTTAGCTGAAGTTGAGATGCTTAGTCGTCTTCACCATAGAAACCTGGTCAAATTGATTGGTATATGTGCCGAGGAAAGCTTCCGCTGCTTGGTTTATGAACTCATTCCAAATGGCAGTGTGGAATCCCATTTGCATGGAGTTGACAGGGAAAACAGTCCACTTGATTGGAGTGCTAGGACGAAGATAGCTCTTGGTGCTGCTCGTGGTCTAGCTTATCTGCATGAAGATTCAAGTCCCCGTGTTATACATAGGGACTTCAAGTCAAGCAACATATTATTGGAAGATGACTTTACACCAAAAGTATCTGATTTTGGATTGGCTCGAACAGCAACGGATGAGGATAACAAACACATATCAACACGCGTAATGGGAACTTTTGGTTATGTAGCTCCGGAATATGCAATGACTGGGCATCTTCTTGTTAAGAGTGATGTTTACAGCTACGGTGTTGTTCTTCTTGAGCTTTTATCGGGAAGAAAACCTGTAGACATGTCGCAACCTTCTGGTCAAGAGAATCTTGTTGCTTGGGCTCGTCCACTTCTCACCAGCAAAGAAGGATTGGAAGCAATAATAGACCCATCTCTGGGATCTGATGTTCCTTTTGACAGTGTGGCCAAAGTTGCAGCCATTGCTTCAATGTGTGTGCAGCCAGAGGTCTCGAACCGCCCTTTCATGGGTGAGGTTGTTCAAGCCTTAAAACTAGTATGTAATGAATGCGACGAAGCAAAAGAAGAAGCAGGTTCAAGAAGTTCTACTCAGGAGGGATTGTCAGTTGATTTGGATGTGGGGGTCAGTAATGTTTGTAGAGAACTACCAGATAACTTCCAAAGCCAATTCTCGGCTGCTAACTTTGATTCGGGTCTTGATGTTGAAAGAGGGTTGTCTGCATCAGAACTATTCAGTTCGTCAGCAAGATTTGGCAGGCAGGAGTCAGGATCATTTAGAAGACACTCATATTCAGGTCCTCTGATAACTGGAAGAAGCAGGCAGTTGTGGCAGATAATGAGAAGGCTTTCTGGTGGCACTGTCAGTGAACATGAAACTACGTTCAAGTTGTGA 3624 0.4456 MVVVLAMMLQLLKLCIIGFFVEVQRSKGLVISPSAPNLPVYPSPSDSWTAIAPSSPEVPNGSFLHPPITLPLPASAPTPQKHKDIEPYSSPNPSPITLSPPYEVVPSPSTLQGNVPPPLKASPPQRKEPAIGPTTPAPAAIPSGRSVNNSPVSQPTEHGTLAPNIDNRNASQRHTAEPVSPSPVAAPLTHSPKNSSGSQPTEHGSLPPKQGTNKAPVALNLPKPSPVSQPTEHGSLPPIAHQGNANTTHNLKPVSPESAASPPWKVEYNPPVAHPLFPTMTPSVLPAPVTQPRSSFPANPPLVHPIVPSVSPSKLPAHVASPMSTPSRSFPWKKGGAPPVAAPLYKTPKPLPAVIHTPAQAPAAHKARQSDHAPEPLMSPKSPSNNEYHFPAFSPSLSSYNHHHTRNTISSPAPASPYMVSPPTSSNQDQATPPSLPPASGQKYYVPPPMNQGSSVPPSSSPIDSTMGKVSPAPSPSIRIAPHPTEMQVPFSPPKASPSGPKTPLLPQVQALPPPPPNEECLSTVCIEPYTNSPPGAPCRCVWPMRVGLRLSVSLYTFFPLVSELASEIATGVFMKQSQVRIMGANAANEQPEKTVVFIDLVPLGENFDGTTAFFISDRFWHKKVVIKASYFGDYDVLYVSYPGMYKFQFSVFPLYHDPFGENFYGILLYIGLPPSPPLPPSTITMIDGGPYSVGGNNGGTIKPLGVDIQKRQHRVGLNRGIIAIIAVSVFLAFVLCTAASWVLFKFRDHVSQPASTPRISQPSLTKAPGAAGSSLTGGGVGSASTSFRSSIAAYTGSAKTFSANDIEKATDNFHASRILGEGGFGLVYSGILEDGKKVAVKVLKREDHHGVREFLAEVEMLSRLHHRNLVKLIGICAEESFRCLVYELIPNGSVESHLHGVDRENSPLDWSARTKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEDDFTPKVSDFGLARTATDEDNKHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLSGRKPVDMSQPSGQENLVAWARPLLTSKEGLEAIIDPSLGSDVPFDSVAKVAAIASMCVQPEVSNRPFMGEVVQALKLVCNECDEAKEEAGSRSSTQEGLSVDLDVGVSNVCRELPDNFQSQFSAANFDSGLDVERGLSASELFSSSARFGRQESGSFRRHSYSGPLITGRSRQLWQIMRRLSGGTVSEHETTFKL* 1208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2343 1207 Gene3D Transferase(Phosphotransferase) domain 1 890 1112 - -
Dod05g2343 1207 MobiDBLite consensus disorder prediction 379 437 - -
Dod05g2343 1207 SUPERFAMILY Protein kinase-like (PK-like) 794 1087 IPR011009 -
Dod05g2343 1207 MobiDBLite consensus disorder prediction 359 504 - -
Dod05g2343 1207 MobiDBLite consensus disorder prediction 240 255 - -
Dod05g2343 1207 MobiDBLite consensus disorder prediction 487 504 - -
Dod05g2343 1207 MobiDBLite consensus disorder prediction 141 178 - -
Dod05g2343 1207 MobiDBLite consensus disorder prediction 187 208 - -
Dod05g2343 1207 Gene3D Phosphorylase Kinase; domain 1 786 889 - -
Dod05g2343 1207 MobiDBLite consensus disorder prediction 456 472 - -
Dod05g2343 1207 CDD STKc_IRAK 820 1088 - -
Dod05g2343 1207 ProSitePatterns Serine/Threonine protein kinases active-site signature. 936 948 IPR008271 GO:0004672|GO:0006468
Dod05g2343 1207 MobiDBLite consensus disorder prediction 754 776 - -
Dod05g2343 1207 MobiDBLite consensus disorder prediction 754 771 - -
Dod05g2343 1207 Pfam Protein tyrosine and serine/threonine kinase 816 1087 IPR001245 GO:0004672|GO:0006468
Dod05g2343 1207 ProSitePatterns Protein kinases ATP-binding region signature. 820 842 IPR017441 GO:0005524
Dod05g2343 1207 PANTHER OS01G0750732 PROTEIN 670 1207 - -
Dod05g2343 1207 MobiDBLite consensus disorder prediction 59 262 - -
Dod05g2343 1207 ProSiteProfiles Protein kinase domain profile. 814 1090 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g2343 1207 PANTHER OS01G0750732 PROTEIN 340 644 - -
Dod05g2343 1207 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 340 644 - -
Dod05g2343 1207 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 670 1207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g2343 Dod-Chr5 49698040 49705670 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g2343 224 1203 Receptor kinase-like Gene Family AT5G56890 53.557 0.0 895
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Dod05g2343 PK_Tyr_Ser-Thr 1.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2343 - - gmx:100816296 1543.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g2343 05 49698040 49705670 Dod05g2343 05 49698040 49705670 ECH