Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2327 ATGGTGATATTGACAAAGTCTTCTGAACTTCAACCACAATGCTTGCATTTCTTCTCCCCAAGAATGCCTCGAAGATTACTCCAAGTTGAGAAATATTTTGAATCAGCAGAGGTGGTGAAGATGATAGGTTCCAACCTAAACAACAACGAGGGAAAGTTGGCAGATGGAAGGCTGGTTGCTGTTAAACAACTGTCTCTTGACAAATCCCTTCAAGGAGAGAGAGAATTTTTGGCAGAGGTGAGATTGATCACAAGCATCCAACACAAAAATCTAGTTCGCCTTCTTGGATGTTGCACAGATGGGTGTCAAAGGATACTTGTATATGAATTCATGAAGAACAGAAGTTTGGACCTCATAGTTTATGGAAAAAGTGATCAATTTCTGAATTGGAGCACAAGGTTCCAAATTATTCTTGGAGTAGCAAGGGGACTGCAATACCTCCATGAGGATTCACATTTCAGAATTGTTCACCGAGATATCAAAGCAAGCAACATTCTCCTTGATGAAAAGTTTCAGCCTAGGATTGGAGACTTTGGGCTAGCTAGGTTCTTCCCTGAAGACCAAGCTTACCTTAGCACTCAGTTCGCTGGAACATTCTTAATTAGAGGTAGTCAAGCGTGGAAACTTTATGAGAAGTCAATGGTGATGGATCTTGTGGATCCAAAGTTGAGAGAACACGGGTTTGTTGAAAAGGATGTTATGCAAGCATTTCATGTGGCCTTGTTATGCCTTCAGCCTCATGCAGATTTGAGACCAGCCATGTCAGAGATCGTAGCATTGTTGACATTCAAGATTGATATGGTTTCAACACCAATGAGGCCAGCCTTCCTTGATAGGAGGCGCAAAAAGCATGATGAGGAGAACAACTCTTGGGAAGCCATATCTGCGGCTTTTTCAACTCCAATAGCCGGTGATGATTCTGCATCCCTACCTAATGCTCCAGCAGTATCTAAAAGCCAGTGA 963 0.4237 MVILTKSSELQPQCLHFFSPRMPRRLLQVEKYFESAEVVKMIGSNLNNNEGKLADGRLVAVKQLSLDKSLQGEREFLAEVRLITSIQHKNLVRLLGCCTDGCQRILVYEFMKNRSLDLIVYGKSDQFLNWSTRFQIILGVARGLQYLHEDSHFRIVHRDIKASNILLDEKFQPRIGDFGLARFFPEDQAYLSTQFAGTFLIRGSQAWKLYEKSMVMDLVDPKLREHGFVEKDVMQAFHVALLCLQPHADLRPAMSEIVALLTFKIDMVSTPMRPAFLDRRRKKHDEENNSWEAISAAFSTPIAGDDSASLPNAPAVSKSQ* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2327 320 SMART serkin_6 27 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g2327 320 Gene3D Phosphorylase Kinase; domain 1 16 110 - -
Dod05g2327 320 ProSiteProfiles Protein kinase domain profile. 36 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g2327 320 SUPERFAMILY Protein kinase-like (PK-like) 52 274 IPR011009 -
Dod05g2327 320 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 55 198 - -
Dod05g2327 320 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 202 276 - -
Dod05g2327 320 PANTHER RECEPTOR-LIKE KINASE 202 276 - -
Dod05g2327 320 PANTHER RECEPTOR-LIKE KINASE 55 198 - -
Dod05g2327 320 Gene3D Transferase(Phosphotransferase) domain 1 203 276 - -
Dod05g2327 320 Gene3D Transferase(Phosphotransferase) domain 1 111 202 - -
Dod05g2327 320 Pfam Protein tyrosine and serine/threonine kinase 55 193 IPR001245 GO:0004672|GO:0006468
Dod05g2327 320 ProSitePatterns Serine/Threonine protein kinases active-site signature. 155 167 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g2327 Dod-Chr5 49546450 49549049 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g2327 50 277 Receptor kinase-like Gene Family AT1G56120 39.706 1.15e-58 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dod05g2327 PK_Tyr_Ser-Thr 2.6e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2327 - - ccaj:109792436 425.631
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g2327 05 49546450 49549049 Dod03g1489 03 19858590 19863364 PCT