Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2316 ATGGGGAACTGTTGGAGTCTTCAATCTGGTTCTCAAGGTGCTCATCCCAACACCAACACTGCATCCAACAACCAACTAGGAAGCAATCAATTTGCTGCTAGTGGCAGCAATTCAAGGCTATTGTGCAGCGGCAATTCTACTTCACTTGGGCGTAGCAGCTACTCTGGAGGATTCAGCCGGTTCTTTGGGACAAGTAGCAGCAATAATACTAGTGCATCACTTTGGGGCTCTGACCATAGCCACAGCACTAGAGCAAGAGATGAAGAGGAGTTCCCTGATGGGCAGATCTTGGATGCTGCAAACTTGAGAGTGTTCACTTTGGCAGAACTGAGGGCAGCCACTGGAGAGTTCAAAGATGTGTTAGGAGAGGGAGGTTTTGGTACAGTATACAAGGGCTGGCTTAAGGAGAGGGGAGCGAGAAATAGAGGTGAAGATTTGACACTAGCCATAAAGAAATTAAATTCTGATAGCTTGCAAGGATTTGCAGAATGGCAGTCCGAGGTTAATTTCTTAGGAAGGGTTTCTCATCCCAACCTTGTAAAGCTGCTCGGGTTTGGGCGACAGGATAGCGAACTATTCGTTGTGTATGAATTTATGCAGAGGGGCAGCTTGGATAACCAGCTATTTGGAAGAGGTGCGAATGTTAGGCCACTTTCGTGGGACACAAGATTAAAGGTTATGATTGGAGCAGCTAGGGGACTTGCTTTCCTTCACTCGTTGGATAAGAATATCATATACAGAGATTTCAAGCCCTCAAATATCTTGCTTGACAGGACGTATACAGCCAAGTTATCAGACTTTGGCTTAGCCAAGTCTGGTCCTTCCGGTGGTGAGTCTCACGTGTCAACTCGAGTCGTGGGAACATATGGCTATGCTGCTCCTGAGTACATGCTAACAGGCCATTTGTACGTGAAAAGTGATGTGTATGGATTTGGAATAGTCTTGGTGGAGATGCTGAGTGGCAAGCGGATATCTGACATATTGCGCCTCAGTCAGCAAAATTCAATACTTGATTGGCTCAAATCAAATATATTGAATAGAGTGAAAATGAGAGGCACTATGGATGCAAGGTTGGAAGGCAAGTATCCACCCAATTTAGCTTTACAAGTAGCTCAACTTGCTTACAAATGCATTGGAGCAGACCCCAAAATCAGGCCATCAATGAAAGAAGTTGTTGAGACATTGGAGCAGATTGAAGCAGCCAATGAGAAACCAGCTGACAATAGAAAGAGGGTTACTAATCCCAAGGCAGTTCAACTACATGGCCGGCCAGATGGTGGTTAA 1284 0.4548 MGNCWSLQSGSQGAHPNTNTASNNQLGSNQFAASGSNSRLLCSGNSTSLGRSSYSGGFSRFFGTSSSNNTSASLWGSDHSHSTRARDEEEFPDGQILDAANLRVFTLAELRAATGEFKDVLGEGGFGTVYKGWLKERGARNRGEDLTLAIKKLNSDSLQGFAEWQSEVNFLGRVSHPNLVKLLGFGRQDSELFVVYEFMQRGSLDNQLFGRGANVRPLSWDTRLKVMIGAARGLAFLHSLDKNIIYRDFKPSNILLDRTYTAKLSDFGLAKSGPSGGESHVSTRVVGTYGYAAPEYMLTGHLYVKSDVYGFGIVLVEMLSGKRISDILRLSQQNSILDWLKSNILNRVKMRGTMDARLEGKYPPNLALQVAQLAYKCIGADPKIRPSMKEVVETLEQIEAANEKPADNRKRVTNPKAVQLHGRPDGG* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2316 427 Gene3D Transferase(Phosphotransferase) domain 1 199 420 - -
Dod05g2316 427 MobiDBLite consensus disorder prediction 402 427 - -
Dod05g2316 427 Pfam Protein kinase domain 118 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g2316 427 PANTHER TRANSFERASE, PROTEIN KINASE RLK-PELLE-RLCK-VIIA-2 FAMILY-RELATED 12 427 - -
Dod05g2316 427 PANTHER OS01G0588500 PROTEIN-RELATED 12 427 - -
Dod05g2316 427 MobiDBLite consensus disorder prediction 67 90 - -
Dod05g2316 427 ProSitePatterns Protein kinases ATP-binding region signature. 121 152 IPR017441 GO:0005524
Dod05g2316 427 ProSitePatterns Serine/Threonine protein kinases active-site signature. 244 256 IPR008271 GO:0004672|GO:0006468
Dod05g2316 427 SUPERFAMILY Protein kinase-like (PK-like) 102 398 IPR011009 -
Dod05g2316 427 ProSiteProfiles Protein kinase domain profile. 115 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g2316 427 Gene3D Phosphorylase Kinase; domain 1 101 198 - -
Dod05g2316 427 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g2316 Dod-Chr5 49453784 49456226 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g2316 83 403 Receptor kinase-like Gene Family AT4G02010 41.399 4.51e-82 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Dod05g2316 Pkinase 3.7e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2316 - - gmx:100813304 597.816