Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dod05g2316 | ATGGGGAACTGTTGGAGTCTTCAATCTGGTTCTCAAGGTGCTCATCCCAACACCAACACTGCATCCAACAACCAACTAGGAAGCAATCAATTTGCTGCTAGTGGCAGCAATTCAAGGCTATTGTGCAGCGGCAATTCTACTTCACTTGGGCGTAGCAGCTACTCTGGAGGATTCAGCCGGTTCTTTGGGACAAGTAGCAGCAATAATACTAGTGCATCACTTTGGGGCTCTGACCATAGCCACAGCACTAGAGCAAGAGATGAAGAGGAGTTCCCTGATGGGCAGATCTTGGATGCTGCAAACTTGAGAGTGTTCACTTTGGCAGAACTGAGGGCAGCCACTGGAGAGTTCAAAGATGTGTTAGGAGAGGGAGGTTTTGGTACAGTATACAAGGGCTGGCTTAAGGAGAGGGGAGCGAGAAATAGAGGTGAAGATTTGACACTAGCCATAAAGAAATTAAATTCTGATAGCTTGCAAGGATTTGCAGAATGGCAGTCCGAGGTTAATTTCTTAGGAAGGGTTTCTCATCCCAACCTTGTAAAGCTGCTCGGGTTTGGGCGACAGGATAGCGAACTATTCGTTGTGTATGAATTTATGCAGAGGGGCAGCTTGGATAACCAGCTATTTGGAAGAGGTGCGAATGTTAGGCCACTTTCGTGGGACACAAGATTAAAGGTTATGATTGGAGCAGCTAGGGGACTTGCTTTCCTTCACTCGTTGGATAAGAATATCATATACAGAGATTTCAAGCCCTCAAATATCTTGCTTGACAGGACGTATACAGCCAAGTTATCAGACTTTGGCTTAGCCAAGTCTGGTCCTTCCGGTGGTGAGTCTCACGTGTCAACTCGAGTCGTGGGAACATATGGCTATGCTGCTCCTGAGTACATGCTAACAGGCCATTTGTACGTGAAAAGTGATGTGTATGGATTTGGAATAGTCTTGGTGGAGATGCTGAGTGGCAAGCGGATATCTGACATATTGCGCCTCAGTCAGCAAAATTCAATACTTGATTGGCTCAAATCAAATATATTGAATAGAGTGAAAATGAGAGGCACTATGGATGCAAGGTTGGAAGGCAAGTATCCACCCAATTTAGCTTTACAAGTAGCTCAACTTGCTTACAAATGCATTGGAGCAGACCCCAAAATCAGGCCATCAATGAAAGAAGTTGTTGAGACATTGGAGCAGATTGAAGCAGCCAATGAGAAACCAGCTGACAATAGAAAGAGGGTTACTAATCCCAAGGCAGTTCAACTACATGGCCGGCCAGATGGTGGTTAA | 1284 | 0.4548 | MGNCWSLQSGSQGAHPNTNTASNNQLGSNQFAASGSNSRLLCSGNSTSLGRSSYSGGFSRFFGTSSSNNTSASLWGSDHSHSTRARDEEEFPDGQILDAANLRVFTLAELRAATGEFKDVLGEGGFGTVYKGWLKERGARNRGEDLTLAIKKLNSDSLQGFAEWQSEVNFLGRVSHPNLVKLLGFGRQDSELFVVYEFMQRGSLDNQLFGRGANVRPLSWDTRLKVMIGAARGLAFLHSLDKNIIYRDFKPSNILLDRTYTAKLSDFGLAKSGPSGGESHVSTRVVGTYGYAAPEYMLTGHLYVKSDVYGFGIVLVEMLSGKRISDILRLSQQNSILDWLKSNILNRVKMRGTMDARLEGKYPPNLALQVAQLAYKCIGADPKIRPSMKEVVETLEQIEAANEKPADNRKRVTNPKAVQLHGRPDGG* | 428 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dod05g2316 | 427 | Gene3D | Transferase(Phosphotransferase) domain 1 | 199 | 420 | - | - | |
Dod05g2316 | 427 | MobiDBLite | consensus disorder prediction | 402 | 427 | - | - | |
Dod05g2316 | 427 | Pfam | Protein kinase domain | 118 | 393 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Dod05g2316 | 427 | PANTHER | TRANSFERASE, PROTEIN KINASE RLK-PELLE-RLCK-VIIA-2 FAMILY-RELATED | 12 | 427 | - | - | |
Dod05g2316 | 427 | PANTHER | OS01G0588500 PROTEIN-RELATED | 12 | 427 | - | - | |
Dod05g2316 | 427 | MobiDBLite | consensus disorder prediction | 67 | 90 | - | - | |
Dod05g2316 | 427 | ProSitePatterns | Protein kinases ATP-binding region signature. | 121 | 152 | IPR017441 | GO:0005524 | |
Dod05g2316 | 427 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 244 | 256 | IPR008271 | GO:0004672|GO:0006468 | |
Dod05g2316 | 427 | SUPERFAMILY | Protein kinase-like (PK-like) | 102 | 398 | IPR011009 | - | |
Dod05g2316 | 427 | ProSiteProfiles | Protein kinase domain profile. | 115 | 398 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Dod05g2316 | 427 | Gene3D | Phosphorylase Kinase; domain 1 | 101 | 198 | - | - | |
Dod05g2316 | 427 | MobiDBLite | consensus disorder prediction | 1 | 29 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dod05g2316 | Dod-Chr5 | 49453784 | 49456226 | Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Dod05g2316 | 83 | 403 | Receptor kinase-like Gene Family | AT4G02010 | 41.399 | 4.51e-82 | 265 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-VIIa-2 | Dod05g2316 | Pkinase | 3.7e-44 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Dod05g2316 | - | - | gmx:100813304 | 597.816 |