Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2312 ATGCCAGTAGATCTAGCGGGAGGAGGGCTTAAGACCAGGAGGATGGAGGAACAGATAGCCATACAAGAGGCTGCTTCCGCTGGGTTGAAGAGCATGGAGCATCTCATCCGAGCCCTTTCTTCACAGTCACAATCACAATCACAACCCTCTTCTTCTTCCTCACACAACAATAATCACCGTCTCGATCTGAACCGCCTCGATTGCGCAGAAATCACCGACTTCACGGTCTCAAAGTTCAAGCAGGTTATTAACTTGTTGAACCGCACAGGTCACGCACGCTTCCGTCGCGCACCTTCTTCTAATCCTTCTCCTTCTCCTGCTCCTTGTTTTTCTGCTCCTCAACCTCAAGTTGAAAAATTCAACCATGTCCAACATCAAACCGTGTCATCTCAGGGATTGACCCTGGATTTTGTGAAGCCCGTTCCGGTCAAGTCAAATAATCCCAAACTGAACCTGAACCCGAACCCGTGTACTGAATTATCGGTTTCACAATACTCTTCAAAGTCCAATAAGGACACGTGTAGCAGCATGTCCCCTCCCATGTCCACCACCACATCCTCCTTCATGTCCTCCATCACCACCGGAGACGGCAGCGTCTCCGACGGTAAGATAGGCCCCGCTATTCTCGCCGCTGCCGCCTCCGGAAAGCCGCCTCTGTCCTCATCTCACCGCAAAAGGTGTCACGACGCCACCCTCTCCGGAAAAGTCTCATCCTCCTCCCACTGCCATTGCTCCAAGAGAAGGAAATCCCGTGTGAAACGAATGATTCGAGTTCCGGCGATAAGCTCGAAGATTGCAGATATCCCAGCAGACGAGTTTTCATGGAGAAAGTACGGTCAAAAACCCATCAAGGGTTCACCTTTCCCACGTGGGTACTACAAGTGCAGCAGCGTGAGAGGGTGTCCAGCGAGGAAGCACGTGGAGCGAGCACAAGACGATCCCAACATGCTCATCGTTACATACGAGGGAGAGCACCGTCACCCCACCGGATCCGCCGTTGGATTCAGCCCTCAGCCCATGTAA 1023 0.523 MPVDLAGGGLKTRRMEEQIAIQEAASAGLKSMEHLIRALSSQSQSQSQPSSSSSHNNNHRLDLNRLDCAEITDFTVSKFKQVINLLNRTGHARFRRAPSSNPSPSPAPCFSAPQPQVEKFNHVQHQTVSSQGLTLDFVKPVPVKSNNPKLNLNPNPCTELSVSQYSSKSNKDTCSSMSPPMSTTTSSFMSSITTGDGSVSDGKIGPAILAAAASGKPPLSSSHRKRCHDATLSGKVSSSSHCHCSKRRKSRVKRMIRVPAISSKIADIPADEFSWRKYGQKPIKGSPFPRGYYKCSSVRGCPARKHVERAQDDPNMLIVTYEGEHRHPTGSAVGFSPQPM* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2312 340 ProSiteProfiles WRKY domain profile. 264 330 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod05g2312 340 Pfam Plant zinc cluster domain 224 267 IPR018872 -
Dod05g2312 340 MobiDBLite consensus disorder prediction 38 59 - -
Dod05g2312 340 MobiDBLite consensus disorder prediction 38 60 - -
Dod05g2312 340 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 11 332 - -
Dod05g2312 340 MobiDBLite consensus disorder prediction 168 189 - -
Dod05g2312 340 Pfam WRKY DNA -binding domain 271 328 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod05g2312 340 Gene3D WRKY domain 254 330 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod05g2312 340 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 11 332 IPR044810 GO:0003700
Dod05g2312 340 SMART WRKY_cls 269 329 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod05g2312 340 SUPERFAMILY WRKY DNA-binding domain 267 329 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g2312 Dod-Chr5 49407265 49409228 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g2312 1 327 WRKY Transcription Factor Family AT2G24570 49.857 3.33e-91 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dod05g2312 WRKY 3.1e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2312 - - gmx:732589 404.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0738 02 9582117 9584671 Dod05g2312 05 49407265 49409228 PCT
Dod05g2312 05 49407265 49409228 Dod03g1481 03 19728561 19730320 PCT