Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2305 GGTACAGAGAAAGGTTTCGAGATAGAAGACGACGACGAAGACCATCACTATCTCTGTTATTTGACCGTTATAGGAAGCATGAGTAGTTACGGCAAGGATGATATAGAGGCTGGTTCCTCGACTCGCGGCTCCGGTGATATAGATGATGGAGGCTTTTCTTCCAGTCCCTTTGAAATTCCCAGAACTAAGGATGCTTCCGTTCAACGCCTCAAGCGTTGGAGACAAGCAGCGCTTGTGCTTAATGCTTCTCGTCGATTTCGTTACACCTTGGACTTGAAGAAAGAAGAAGAAAGGGAGCAAGTGCTGAGAAAGATTAGAGCTCATGCACAAGCCATTAGAGCAGCATATCTTTTCAAGGCCTCTGGGCAGAAAGTGAATGGAGTTGTAAAACCACCTCCACCCCCCCCTGGAGAGTTTCAAATTGGACAAGAGCTACTTTCTTCAATTGCAAGGGATCATAATATGAATGAACTGCAGAAAAATGGAGGAGTCGCAGGGCTAGCAAGTTTGTTAAAAACCAATTTAGAGAAGGGGATTCAAGGTGATGATGCTGACTTGGTAAAACGGAGGAATGCTTTTGGTTCCAACAACTATCCTCGAAAGAAAGGAAGAAGTTTCCTGATGTTTGTGTGGGATGCTTGCAAGGATCTGACCTTGATTATTTTAATGGTAGCTGCAGCAGCTTCATTAGCACTGGGGATAAAATCTGAGGGTATTAAGGAAGGATGGTATGATGGTGGAAGCATAGCTTTTGCTGTTGTTCTTGTTATTGTTGTTACAGCTATAAGTGATTATAAGCAATCTCTTCAGTTTCGAGACCTAAATGAGGAGAAGAGAAACATACGTTTGGAGGTCATTAGAGGTGGTAGAAGAGTTGTGATCTCTATATATGATATTGTTGTTGGTGATGTCATACCCCTCAATATTGGTAACCAGGTCCCTGCTGATGGAATTTTGATCACTGGTCACTCTCTTGCAATTGATGAATCTAGCATGACAGGGGAGAGTGATATTGTTGATAAGAATTCTAAGAACCCTTTTCTGATATCTGGGTGTAAAGTTGCAGATGGCAGTGGCGTTATGCTGGTGACCGCTGTTGGTATTAATACGGAATGGGGGCTTCTAATGGCTAATGTTTCAGAAGACAACGGTGAAGAAACACCTTTGCAGGTACGCTTAAATGGTGTTGCCACCTTCATTGGTATAGTTGGGCTCTCTGTTGCTGTCATTGTTCTGATTGTGCTACTTGCCAGGTATTTCTCTGGGCATACTAAAAACCCAGATGGAAGTATTCAATTTAGAGCCGGCAAGACTAAACTTAGTACTGCAATTGATGGAGCAATTAAGATTGTCACTGTTGCGGTTACCATTGTAGTGGTTGCAGTACCTGAAGGGCTCCCTCTGGCAGTTACCTTAACACTTGCCTACTCTATGAGAAAAATGATGGCAGACAAAGCTTTGGTGCGGAGGCTTTCTGCCTGTGAGACGATGGGCTCGGCCACAACCATTTGCAGTGATAAGACTGGAACATTGACTATGAATCAGATGACTGTTGTTGAGGCTTATGTTGGTGAGAAGAAGATTGATCCTCCTCACAAGAAGTCAGAGCTCTCTCCTTGGCTCTGCTCTTTGCTGATTGAAGGAGTTGCACATAACACCAATGGCAGTGTTTATGTACCTGAGGGCGGCAATGATGTTGAGATTTCTGGATCACCAACAGAAACGGCAATTTTACGTTGGGCTGTTCAGCTTGGGATGAATTTTGATGCTGATAGATCGGAATCATCAATTATTCATGTCTTTCCATTCAATTCTGATAAAAAACGAGGCGGGGCTGCAATACAGACGACTGAATCTGAAATCCGTATACATTGGAAAGGGGCTGCTGAGATAGTCCTAGGCTGCTGTACATGGTATATTGATGCAAATGATCAGTTGGTGAAGATGGATGAAGAGAAGATGAAGTTTTTTAGTAAAGTTATTGAAGATATGGCTGCTCATAGTCTACGTTGTGTTGCCATTGCATATAGATTATATGAAATGGAGAAAGTTCCAGCTAGTGAAGAACTTGTACGGTGGTCACTACCGGAGGATGATCTCATTTTACTGGCTATTGTTGGTCTGAAGGATCCTTGTCGACCTGGTGTCAAAGATGCAGTGCAGCTTTGTGAGAAAGCTGGGATTAAGGTAAAAATGGTCACCGGTGACAATGTTAAAACTGCAACAGCAATTGCTGTGGAATGTGGAATACTTGTTTCGGCTGATGCTACAGAGCCGACCATCATTGAAGGAAAAATATTCCGTGCCATGACACCGACACAGAGAGAGAGTATTGTTGAAAAAATATCGGTTATGGGACGATCATCTCCAAATGACAAGCTTTTGCTCGTGCAAGCATTGAGGAAGGAGGGGCATGTTGTGGCTGTAACTGGGGATGGAACTAATGATGCTCCTGCACTACATGAGGCTGATATAGGTCTTGCAATGGGTATTCAAGGTACAGAAGTTGCTAAAGAGAGCTCTGATATCATTATTTTGGATGACAATTTTGCTTCAGTTGTAAAGGTTGTCAGGTGGGGCCGGTCTGTGTATGCAAATATTCAGAAATTTATCCAGTTTCAGCTTACAGTCAATATGGCAGCTCTTGTTATAAATGTTGTTGCTGCATTTTCCTCGGGTGATGTACCACTAAATACAGTACAGCTTCTCTGGGTAAATCTTATCATGGATACTCTTGGAGCTCTAGCCTTGGCAACTGAACCACCAACTGATCACCTGATGGATTGTCGTCCGAAGGGTCGAAGTGAACCTCTCATAACAAATATTATGTGGAGGAATCTACTGATACAGGCAATGTACCAGGTGTGTGTCTTGCTTATACTCAATTTCCGAGGCAAGAACATACTGCTTTTGAGGGACGAGCCCAACGAATATGCAATTAAAGTGAAGGACACTTTAATATTTAATGCATTTGTTCTTTGTCAAGTCTTTAACGAATTTAATGCTCGGAAGCCGGATGAGCTCAATATATTCCAGGGAGTTACAAGAAACTACCTTTTTATGGGGATAGTGGGATTAACTATTGTGCTTCAGATCATCATCATTGAATTTCTTGGGAAGTTCACTAAAACAGTCAAGCTTAATTGGAAACAGTGGCTTATTTGTGTCATTATTGGATTTATCAGCTGGCCTCTTGCTGCGGTTGGGAAAATGATACGAATGCCAGAGGCTCAACTCAGTGGGTATTTTAGGCACTGTGTAGACGGGATAAATCGTTGTGTAAAGTGGATATGTTGTAAGTAA 3303 0.4257 GTEKGFEIEDDDEDHHYLCYLTVIGSMSSYGKDDIEAGSSTRGSGDIDDGGFSSSPFEIPRTKDASVQRLKRWRQAALVLNASRRFRYTLDLKKEEEREQVLRKIRAHAQAIRAAYLFKASGQKVNGVVKPPPPPPGEFQIGQELLSSIARDHNMNELQKNGGVAGLASLLKTNLEKGIQGDDADLVKRRNAFGSNNYPRKKGRSFLMFVWDACKDLTLIILMVAAAASLALGIKSEGIKEGWYDGGSIAFAVVLVIVVTAISDYKQSLQFRDLNEEKRNIRLEVIRGGRRVVISIYDIVVGDVIPLNIGNQVPADGILITGHSLAIDESSMTGESDIVDKNSKNPFLISGCKVADGSGVMLVTAVGINTEWGLLMANVSEDNGEETPLQVRLNGVATFIGIVGLSVAVIVLIVLLARYFSGHTKNPDGSIQFRAGKTKLSTAIDGAIKIVTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTMNQMTVVEAYVGEKKIDPPHKKSELSPWLCSLLIEGVAHNTNGSVYVPEGGNDVEISGSPTETAILRWAVQLGMNFDADRSESSIIHVFPFNSDKKRGGAAIQTTESEIRIHWKGAAEIVLGCCTWYIDANDQLVKMDEEKMKFFSKVIEDMAAHSLRCVAIAYRLYEMEKVPASEELVRWSLPEDDLILLAIVGLKDPCRPGVKDAVQLCEKAGIKVKMVTGDNVKTATAIAVECGILVSADATEPTIIEGKIFRAMTPTQRESIVEKISVMGRSSPNDKLLLVQALRKEGHVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNMAALVINVVAAFSSGDVPLNTVQLLWVNLIMDTLGALALATEPPTDHLMDCRPKGRSEPLITNIMWRNLLIQAMYQVCVLLILNFRGKNILLLRDEPNEYAIKVKDTLIFNAFVLCQVFNEFNARKPDELNIFQGVTRNYLFMGIVGLTIVLQIIIIEFLGKFTKTVKLNWKQWLICVIIGFISWPLAAVGKMIRMPEAQLSGYFRHCVDGINRCVKWICCK* 1101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2305 1100 Gene3D - 501 855 IPR023214 -
Dod05g2305 1100 Pfam Cation transporting ATPase, C-terminus 895 1071 IPR006068 -
Dod05g2305 1100 ProSitePatterns E1-E2 ATPases phosphorylation site. 506 512 IPR018303 -
Dod05g2305 1100 Gene3D - 65 120 - -
Dod05g2305 1100 PRINTS P-type cation-transporting ATPase superfamily signature 328 342 - -
Dod05g2305 1100 PRINTS P-type cation-transporting ATPase superfamily signature 704 715 - -
Dod05g2305 1100 PRINTS P-type cation-transporting ATPase superfamily signature 834 846 - -
Dod05g2305 1100 PRINTS P-type cation-transporting ATPase superfamily signature 726 736 - -
Dod05g2305 1100 PRINTS P-type cation-transporting ATPase superfamily signature 810 829 - -
Dod05g2305 1100 PRINTS P-type cation-transporting ATPase superfamily signature 504 518 - -
Dod05g2305 1100 PANTHER CALCIUM-TRANSPORTING ATPASE 53 1090 - -
Dod05g2305 1100 SUPERFAMILY Calcium ATPase, transmembrane domain M 162 1073 IPR023298 -
Dod05g2305 1100 Gene3D - 185 380 - -
Dod05g2305 1100 Gene3D - 212 1071 - -
Dod05g2305 1100 Pfam E1-E2 ATPase 282 482 - -
Dod05g2305 1100 SFLD p-type atpase 486 862 IPR044492 -
Dod05g2305 1100 SUPERFAMILY Calcium ATPase, transduction domain A 282 376 IPR008250 -
Dod05g2305 1100 PANTHER CATION TRANSPORTING ATPASE 53 1090 - -
Dod05g2305 1100 Pfam Ca2+-ATPase N terminal autoinhibitory domain 55 97 IPR024750 GO:0005516
Dod05g2305 1100 CDD P-type_ATPase_Ca_PMCA-like 188 943 - -
Dod05g2305 1100 SFLD Haloacid Dehalogenase 486 862 - -
Dod05g2305 1100 SUPERFAMILY HAD-like 502 915 IPR036412 -
Dod05g2305 1100 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 445 527 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Dod05g2305 1100 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 777 890 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Dod05g2305 1100 MobiDBLite consensus disorder prediction 35 59 - -
Dod05g2305 1100 PRINTS H+-transporting ATPase (proton pump) signature 657 675 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Dod05g2305 1100 PRINTS H+-transporting ATPase (proton pump) signature 842 867 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Dod05g2305 1100 PRINTS H+-transporting ATPase (proton pump) signature 810 826 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Dod05g2305 1100 Gene3D - 514 711 IPR023299 GO:0000166
Dod05g2305 1100 SMART Cation_ATPase_N_a_2 163 234 IPR004014 -
Dod05g2305 1100 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 154 1072 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Dod05g2305 1100 Pfam haloacid dehalogenase-like hydrolase 501 824 - -
Dod05g2305 1100 Pfam Cation transporter/ATPase, N-terminus 161 229 IPR004014 -
Dod05g2305 1100 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 511 708 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g2305 Dod-Chr5 49347277 49364017 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g2305 28 1092 Primary Pumps ATPases AT4G29900 71.589 0.0 1542
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2305 K01537 - gmx:100792945 1666.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g2305 05 49347277 49364017 Dod03g1474 03 19566693 19584613 PCT