Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2293 ATGTCTTCATGTCTAAGCGGAGCTGGCGGAAGAACCTACGGGTTCGATTTCGAATTCATGAAATCGGCATCTTCATCCACCAGAACTTCACACACCTCTTCGTCGCCATCGTCAACCATCTCCGAATCGAGCAACTCCCCTTTAGCAATCTCAACCCGAAAGCCCAGAACGCCGCGGAAGCGGCCCAACCAAACCTACAACGAAGCCGCGGCGCTACTCTCCACAGCATACCCGAACCTCTTCAAAACGACGCCGCACAACAGCTTCACAATAAAACCGTCTCCGCCAGAAAACAGCACCACCAATACGACGTCGTCGTCGTTCTTGGACGAATCCACGGAACTTCTATTGCCGTTCAGAGTGTTCGATGATGATGGCTCTTCGTTCTTGCTCCACCACCGCGAACCGACAATCTTCGCTGCGGCGGAGCCCAAGGTGGTGGTGAGCGTGCATCAGCAGCAGGAGAAGGCGTGCCAGAGCCCAGGGGAGATAAGCTCGAGGGTGAATGCGCTGGAACTTGAGGACCATTGCGAAGATGATTTCGATGCCGAATCGATGCTCGACGAGGAAATCGAGGAAGGAATCGATAGCATCATGGGGAACAGCGTTGAATTAGACTCGTCCATTAATGGCGATTCTTATAAAGAGAATCCGTGGGTTGGTTTTGGCGGGAAATTGGACTTCCGGCTAGGGTTGCGGAGGGCTGGGGTGAGGGCTCTCCGCCACGTGAACGACGGTAATTGGTGGAATTTTCCGGCTGTGGATATCCTCCAGATATCGCCCAAAATCGGAAACAAGCCTGCTCCGGCGGCGGCTGCTCCGGTTGCGGAGAAGGAGAAGAAGATGAAGAAGAAGAAGGTGGAGAAACCGAGCGTGGAAGCTGCGAAGAACAACGGTGAATCGCCGAAGGGGAATAGTATTCCCCCGAAACCGAATTCGGGTTCGTTGATGTTGAAATTGAATTACGACGGTGTTCGGAATGCTTGGTCCGACAATGGGTCGCCGTTCGCCGACGACAGCCCCGCAGCTGACCTGCCGGGAAATGACGTCACCGCGCGGCTGTCACAAATTGATTTGTTGTGGGACAACGGAGGGGTGAGAGAGGCTAGCGTGCTGCGCTATAAAGAAAAGCGGCGTACACGCCTCTTCTCCAAGAAGATCAGGTACCAGGTCAGGAAGCTCAACGCTGATCGACGGCCCAGAATGCAGGGGCGATTTGTTAGGAGGCCGAATTCTAACTCAAATGCGCACAGATGA 1257 0.5418 MSSCLSGAGGRTYGFDFEFMKSASSSTRTSHTSSSPSSTISESSNSPLAISTRKPRTPRKRPNQTYNEAAALLSTAYPNLFKTTPHNSFTIKPSPPENSTTNTTSSSFLDESTELLLPFRVFDDDGSSFLLHHREPTIFAAAEPKVVVSVHQQQEKACQSPGEISSRVNALELEDHCEDDFDAESMLDEEIEEGIDSIMGNSVELDSSINGDSYKENPWVGFGGKLDFRLGLRRAGVRALRHVNDGNWWNFPAVDILQISPKIGNKPAPAAAAPVAEKEKKMKKKKVEKPSVEAAKNNGESPKGNSIPPKPNSGSLMLKLNYDGVRNAWSDNGSPFADDSPAADLPGNDVTARLSQIDLLWDNGGVREASVLRYKEKRRTRLFSKKIRYQVRKLNADRRPRMQGRFVRRPNSNSNAHR* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2293 418 MobiDBLite consensus disorder prediction 298 312 - -
Dod05g2293 418 MobiDBLite consensus disorder prediction 265 313 - -
Dod05g2293 418 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 1 413 - -
Dod05g2293 418 MobiDBLite consensus disorder prediction 84 106 - -
Dod05g2293 418 ProSiteProfiles CCT domain profile. 367 409 IPR010402 GO:0005515
Dod05g2293 418 MobiDBLite consensus disorder prediction 276 293 - -
Dod05g2293 418 MobiDBLite consensus disorder prediction 25 63 - -
Dod05g2293 418 MobiDBLite consensus disorder prediction 25 52 - -
Dod05g2293 418 PANTHER OS02G0148000 PROTEIN 1 413 - -
Dod05g2293 418 Pfam CCT motif 367 409 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g2293 Dod-Chr5 49155979 49159226 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g2293 310 409 C2C2-CO-like Transcription Factor Family AT1G73870 47.009 2.01e-21 93.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Dod05g2293 CCT 5.8e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2293 - - adu:107496352 507.679