Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2279 ATGGCTTCCCAGCAAGAGACGATCAAGAGCAATAATAAGGCAGAGAAGAAGAAGTTGCAGAAGAGCTACTTCGATGTCCTAGGGTTGTGCTGCTCTTCAGAGGTTCCACTGATTGAGAACATCCTGAAGCCTCTCGAAGGAATCAAGGAGGTTTCAGTCATCGTCCCCTCACGCACTGTTATTGTTGTCCACAACAGGCTCGTCACTTCGCAGCTTCAAATTGGAAGATCACAACCAAACCTCTATCATCACTACTCATCATCATCATCAGTTTTCAATATCAAAAAAAATAAAAAAGGAGAAGCCGCGGCGGACCTTCAGCCAGAACCACCGCAGTCCAAGCCTCCTAACCGCCCAGCCGCGCCACTGCCCCTTCTGCGGAACCAGCCAGCACAGCCGCGACCTCACAGCCGCTGCACTCTCCGTGCCTCAACTCCGCATAGCACCAGAACCCACCACCGCAGAGATCGTGAATCCATCAGCCTAGATCTGCGCCATCCTACCCTCCTCCGCCAGCTCCAAACCACCGCGAGCAGCGCTCGCCGTCCACGCAGACCAGGCTCCCACTGCCCCGCGAACCACCTCGTGAAGTCTCTCACACCGCCGCGGCTAAGCCTCCTTCCGTCCAGCAGCACCCTTCCAATCACGCAGTCAGACGTCCTCGCGAAGCCGCCGTGA 678 0.559 MASQQETIKSNNKAEKKKLQKSYFDVLGLCCSSEVPLIENILKPLEGIKEVSVIVPSRTVIVVHNRLVTSQLQIGRSQPNLYHHYSSSSSVFNIKKNKKGEAAADLQPEPPQSKPPNRPAAPLPLLRNQPAQPRPHSRCTLRASTPHSTRTHHRRDRESISLDLRHPTLLRQLQTTASSARRPRRPGSHCPANHLVKSLTPPRLSLLPSSSTLPITQSDVLAKPP* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2279 225 SUPERFAMILY HMA, heavy metal-associated domain 18 69 IPR036163 GO:0046872
Dod05g2279 225 MobiDBLite consensus disorder prediction 109 129 - -
Dod05g2279 225 CDD HMA 24 71 IPR006121 GO:0046872
Dod05g2279 225 PANTHER CADMIUM/ZINC-TRANSPORTING ATPASE HMA4-RELATED 5 76 - -
Dod05g2279 225 MobiDBLite consensus disorder prediction 168 182 - -
Dod05g2279 225 MobiDBLite consensus disorder prediction 99 196 - -
Dod05g2279 225 Gene3D - 15 77 - -
Dod05g2279 225 PANTHER CADMIUM/ZINC-TRANSPORTING ATPASE HMA2-RELATED 5 76 - -
Dod05g2279 225 ProSiteProfiles Heavy-metal-associated domain profile. 21 74 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g2279 Dod-Chr5 48967581 48970777 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g2279 17 77 Primary Pumps ATPases AT4G30110 70.492 1.39e-22 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2279 K01534 - gmx:100817567 105.916