Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2278 ATGGCTTCCCAGCAAGAGACGATCAAGAGCAATAATAAGGCAGAGAAGAAGAGGTTGCAGAAGAGCTACTTTGATGTCCTGGGGTTGTGCTGCTCTTCAGAGGTTCCACTGATTGAGAACATGCTGAAGCCTCTCGAAGGAATCAAGGAGGTTTCGGTCATTGTCCCCTCACGCACTGTTATTGTTATTCACGACAGCCTTGTCATTTCACAACTTCAAATTGTTAAGGCTCTCAATCAAGCAAGACTAGAAGCGAATCTCAGGGTGAATGGGGACCAAAAGCATCAAAAGAAATGGCCAAGCCCATACGCGGTGGCTTGTGGCTTGCTACTTTTGCTTTCATTGCTCAAATATGTCTATCACCCCTTGAAATATCTGGCCCTCGGAGCTGTAGCCGCTGGCATCTTCCCAATAATCTTGAAGGCTGTTGTGTCCATCCAGAACCTTAGACTTGACATTAACATTCTCATGATCATAGCAGTTGCTGGGACGGTTGCTATGCATGATTATTTGGAAGCCGGCACAATTGTTTTCCTTTTCTCAATTGCAGAATGGCTAGAGACAAAGGCAAGCCACAAGGCAAATGCAGTAATGTCATCATTGATGAATATAGCCCCACAAAAAGCAGTGATAGCAGAAACAGGAGAGGTTGTGGATGCTGATGAGGTGGAAGTAAACACCATCATAGCAGTTAAAGCAGGGGAGGTGATACCCATTGATGGAGTTGTTTTAGATGGAAGTTGTGAAGTTGACGAGAAAACATTGACTGGAGAATCATTCCCAGTTGCTAAGCAAAAGGATTCTACTATTTGGGCTGGCACCATTAATTTAAATGGTTATATTAGTGTTAAAACTACTGCACTGGCTGAGGATTGTGTGGTGGCAAAAATGGCAAAGCTAGTGGAAGAAGCTCAAAACAGCAAAACAAGCACTCAGAGACTGATTGACAAGTTTGCCAAGTTTTACACCCCGGCTGTTGTCGTCATATCAACTCTCGTGGCGGTGATTCCGATTGCATTAAAAGTACATAACGAGAAACACTGGCTTCACTTTGCACTGGTTGTTTTAGTGAGTGCATGTCCATGTGCACTTGTCCTTTCAACCCCAGTTGCAACCTTTTGTGCTTACACAAAAGCAGCTACATCCGGTCTTCTCATCAAAGGGGGTGACTATCTTGAAACACTTGCAAAAATTAAGATCATGGCCTTTGACAAAACGGGTACCATAACAAAGGGGGAATTTGTGGTGACCAATTTTCTATCACTCTCAGATGACATTGATTTGAACAAATTGCTTTACTGGGTGTCAAGTATTGAGAGCAAGTCAAGCCATCCATTGGCTGCAGCAATTGTTGAATATGGAAGGTCTCTAGCCATTGAACCAAACCCAGAAAAGGTGACCGAATTTGACAATTTTCCAGGGGAAGGAATCTGTGGAAAAATTGACGAGAGAGTTCTTTACATTGGAAATAAAAAAATTGCCACCAGAGCTGGCTCTGAAACAGTTCCAACATTACAAGGTGAAATTCAAAGAGGAAAGACCACTGGATACATATACTTTGGAGCAATCCCTATTGGATTCTTCTCTCTCTCGGATGCTTGCCGATCAGGTGCTCAGGATGCAATAGGGCATCTGAAGTCGTTGGGAATCAAAACAGCTATGCTCACTGGAGACAGCCAAGCAGCTGCAATGCAAGCACAGGAACAGCTAGGGAATGCTCTGGAGTTGGTCCATGCAGAACTTTTGCCAGAAGACAAGATGAAGTTCATCTCGGAATTCAAGAAGGAAGGGCCAACGGCAATGGTTGGAGATGGTTTAAATGATGCACCGGCATTAGCAACAGCTGATATTGGAATCTCAATGGGAATTTCAGGTTCTGCACTGGCAAGTGAGACTGGCAACATAATTCTTATGTCAAATGACCTTAGGAAGATACCAGAAGCCATTAAGCTTGCCAGAAAATCTCGTAGGAAAGTGATAGAAAATATTATTTTGTCAGTCATTACTAAGGCCGCAATTCTTGGTTTGGCCATTGGTGGTCATCCAATTGTTTGGGCAGCAGTTCTTTCTGATGTTGGAACATGTCTGTTGGTCATCCTAAACAGCATGTTACTTCTAAGAGGAGGACACAAGCATGGAGGAAAATGTTGTAAGTCTTCCACTCAACAACATGCCCATAAACATGGATGTGGTGGCACCGACGGCAGTTCTTCTCATCATCACCATCATAAACACCAACATAAGCATCAACATCATCAGCATCATAGCCACAAGAATTGTTGCTCAGACAAGACAAAACAGGTGTCTGAGCCTAAGAAGTGTGCCTCCCAGACATGTTCCTCAAAGTGTCAGCCCTTCCCTTCAAATTCAAGTTTAGGTGGAAATGCTAAGCATCATAATGCCATGGAGAGTCATGATCAATGCAAGGGAAGTGATGAAGTTCATGAAGCGGATCATTGTCATCATGGAAGATGTGACAAGAGTGAAGATGGAGTCCAGAAGCATGATATTGAACAGCAGTGTTGTTCCAATTCGCCCAATGAGATTCTAAATGCAGAACATAATGCTGAAGTTCATGGTAATTGTTTGGGACATAAGGCACATGGGACAAACCACTGCCACAACAAAGAGGTTGACATGGTTACACATGATAGGCCATCATCACATAGTTCTTGCCATCTCAATCATTCTTGTCAAACAGAAAGGCAACAATCTACCAATAAACATTGCCTCATGATCCGGGGTTGTGAAAATCCGAAAGATCATGAATCCATTCATATGTTAAGATCCAATCATGAAATTGAGCATCAACATTCAGGTTGTCATTCTGATTCTGAGAAGTGTGAGACAGATGAAATATCCGTTGAGATCACCAGTGAGCCTGTTGAATCAGCCTCAAAGCATGGTTGTTTGAAAGGAAAAGAAAACAGTTCCTGCTGCAACAATATTGGTTGCTCTGACACCTGCGAGGTTCTTCCTGTGGAGTGTGCCTGTGAGAGTTTAAATGAGAGACCAGTCAGTGCATGTTGCAGAAATGATGAGGGCTCTTCAAAAGAATCCACTAATGTGCATGCTTGTATTAGTTTGGGCAAGAGAGAAGTTGGTGGATGCTGCAAGAGCTACATGAAGGAATGCTGTGCCAAACATGGACATTCAAGGGCTGGTTTTGTAGGAGGTTTGTCAGAAATCATTACAGAATAG 3201 0.4314 MASQQETIKSNNKAEKKRLQKSYFDVLGLCCSSEVPLIENMLKPLEGIKEVSVIVPSRTVIVIHDSLVISQLQIVKALNQARLEANLRVNGDQKHQKKWPSPYAVACGLLLLLSLLKYVYHPLKYLALGAVAAGIFPIILKAVVSIQNLRLDINILMIIAVAGTVAMHDYLEAGTIVFLFSIAEWLETKASHKANAVMSSLMNIAPQKAVIAETGEVVDADEVEVNTIIAVKAGEVIPIDGVVLDGSCEVDEKTLTGESFPVAKQKDSTIWAGTINLNGYISVKTTALAEDCVVAKMAKLVEEAQNSKTSTQRLIDKFAKFYTPAVVVISTLVAVIPIALKVHNEKHWLHFALVVLVSACPCALVLSTPVATFCAYTKAATSGLLIKGGDYLETLAKIKIMAFDKTGTITKGEFVVTNFLSLSDDIDLNKLLYWVSSIESKSSHPLAAAIVEYGRSLAIEPNPEKVTEFDNFPGEGICGKIDERVLYIGNKKIATRAGSETVPTLQGEIQRGKTTGYIYFGAIPIGFFSLSDACRSGAQDAIGHLKSLGIKTAMLTGDSQAAAMQAQEQLGNALELVHAELLPEDKMKFISEFKKEGPTAMVGDGLNDAPALATADIGISMGISGSALASETGNIILMSNDLRKIPEAIKLARKSRRKVIENIILSVITKAAILGLAIGGHPIVWAAVLSDVGTCLLVILNSMLLLRGGHKHGGKCCKSSTQQHAHKHGCGGTDGSSSHHHHHKHQHKHQHHQHHSHKNCCSDKTKQVSEPKKCASQTCSSKCQPFPSNSSLGGNAKHHNAMESHDQCKGSDEVHEADHCHHGRCDKSEDGVQKHDIEQQCCSNSPNEILNAEHNAEVHGNCLGHKAHGTNHCHNKEVDMVTHDRPSSHSSCHLNHSCQTERQQSTNKHCLMIRGCENPKDHESIHMLRSNHEIEHQHSGCHSDSEKCETDEISVEITSEPVESASKHGCLKGKENSSCCNNIGCSDTCEVLPVECACESLNERPVSACCRNDEGSSKESTNVHACISLGKREVGGCCKSYMKECCAKHGHSRAGFVGGLSEIITE* 1067
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2278 1066 Gene3D - 15 89 - -
Dod05g2278 1066 SUPERFAMILY HAD-like 402 703 IPR036412 -
Dod05g2278 1066 Gene3D - 413 534 IPR023299 GO:0000166
Dod05g2278 1066 SUPERFAMILY HMA, heavy metal-associated domain 18 86 IPR036163 GO:0046872
Dod05g2278 1066 Gene3D - 393 653 IPR023214 -
Dod05g2278 1066 MobiDBLite consensus disorder prediction 738 759 - -
Dod05g2278 1066 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 153 705 IPR027256 GO:0006812|GO:0016021|GO:0019829
Dod05g2278 1066 PRINTS Copper-transporting ATPase signature 580 597 - -
Dod05g2278 1066 PRINTS Copper-transporting ATPase signature 193 211 - -
Dod05g2278 1066 PRINTS Copper-transporting ATPase signature 324 338 - -
Dod05g2278 1066 PRINTS Copper-transporting ATPase signature 637 651 - -
Dod05g2278 1066 CDD P-type_ATPase_HM 126 704 - -
Dod05g2278 1066 PRINTS P-type cation-transporting ATPase superfamily signature 251 265 - -
Dod05g2278 1066 PRINTS P-type cation-transporting ATPase superfamily signature 402 416 - -
Dod05g2278 1066 PRINTS P-type cation-transporting ATPase superfamily signature 548 558 - -
Dod05g2278 1066 PRINTS P-type cation-transporting ATPase superfamily signature 626 638 - -
Dod05g2278 1066 PRINTS P-type cation-transporting ATPase superfamily signature 602 621 - -
Dod05g2278 1066 SFLD C1.7: P-type atpase like 385 654 - -
Dod05g2278 1066 PANTHER CADMIUM/ZINC-TRANSPORTING ATPASE HMA4-RELATED 6 960 - -
Dod05g2278 1066 PANTHER CADMIUM/ZINC-TRANSPORTING ATPASE HMA2-RELATED 6 960 - -
Dod05g2278 1066 SFLD p-type atpase 385 654 IPR044492 -
Dod05g2278 1066 Pfam E1-E2 ATPase 212 380 - -
Dod05g2278 1066 SUPERFAMILY Calcium ATPase, transduction domain A 216 301 IPR008250 -
Dod05g2278 1066 MobiDBLite consensus disorder prediction 727 762 - -
Dod05g2278 1066 Gene3D - 191 305 - -
Dod05g2278 1066 ProSiteProfiles Heavy-metal-associated domain profile. 21 87 IPR006121 GO:0046872
Dod05g2278 1066 SUPERFAMILY Calcium ATPase, transmembrane domain M 153 396 IPR023298 -
Dod05g2278 1066 Pfam haloacid dehalogenase-like hydrolase 398 616 - -
Dod05g2278 1066 ProSitePatterns E1-E2 ATPases phosphorylation site. 404 410 IPR018303 -
Dod05g2278 1066 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 176 680 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Dod05g2278 1066 TIGRFAM ATPase-IB2_Cd: cadmium-translocating P-type ATPase 153 493 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g2278 Dod-Chr5 48937458 48950846 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g2278 17 1066 Primary Pumps ATPases AT4G30110 53.774 0.0 1055
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2278 K01534 - gmx:100817567 1495.33