Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2272 ATGCCAGTAACCTTGAAAGGGTGTTACACAGTGAGACCAATGGAGCCAACATGGTGCGGTCGCTTACCATTATCCGAATGGGACCAAATAGGAACCATAACCCACGTCCCCACCATTTACTTCTACACCCCTTCACAAAACTGGCTTTCCCCACACTCCGCAATTGCCAACACCTTGAAAGACTCTTTAAGCCGTGCCCTTGTGCCGTTTTACCCACTTGCCGGTCGTTTACGCTCGATTGGCAACGGTCGTTTAGAGCTAGACTGCAACTCCATGGGCGCGCGTTTCATCGAGGCCGAATCCACGTCAGCACTAAGCAACCTCGGCGACTACTCGCCTTCCTCGGAGTACCCTCACCTCGCGCCGCGCGTGGACTACACGCTCCCAATCCACGAGCTGCCCCTGGTGCACGTGCAGGTCACCCGCTTCACGTGCGGCGCAATTAGCCTGGGGATAGCGATTTCCCATGCGGTGGCCGACGGGCAGAGCGCGTTGCACTTCATCAGCGAGTGGTCGAGGCTGGCGCGTGGGGAGCCCATGAAAACGACGCCGTTTCTCGACAGGAGAGTGTTGCGTGCTGGGGAGCCACCTTCAATGCCGTTGCCAGCGTGTCATGCTTACTCACACTACGAATGCCCTCCACTACTGCTTGGCCAAATCAGCAGCACCGAACAAAGGAAGAAAAAAACCACCGTGGCAATTCTAAAACTAAGCAAGGACCAAGTTGAGAGGTTGAGAAGAAAAGCTAATGAAGCTTTGCCTCGTAACGATCGAAGCTATACGAGGTACGAGACTGTGACGGGACACGTGTGGATAAGTGCGTGTAAGGCTAGAGGGCACAAACACGACCAACTAATGGGTTTGGGTGTTTGTGTCGACACAAGGTGTCGCATGCAACCACCTTTGCCGAAAGGGTATTTTGGGAATGCGACGTTGGACGTGGTTGCCACGTGTGTTGCTGGTGATTTGGTTGAGAAGCCGTTAGGGTTTGTTTCGAGGAGGATTAGGGAGGCGATTGAGAAGGTGAGTGATGGGTATGTGAGGACAGGGATTGAGTTCTTGAAGAACCAGGAGGATTTGACAAGGTTTCAGGATCTTCATGCTGTGAGGAGTGATAAAGGGCCTTTCTATGGGAACCCTAATATGGGTGTGGTGAGTTGGTTGACTTTGCCGATCAATGGGCTTGACTTTGGGTGGGGGAAGGAGGTTCAGATGTATCCTGGGACGCATGAGTTTGATGGGGATTCTGTGCTTCTTCCTGGTCCTGATGGGGATGGGTCTGTGCTTGTTGCTATTTGTTTGCAAGTGGATCATATGGATGCGTTTAAGAAGCATTTTTATGAGGATATTGTGTAA 1356 0.5229 MPVTLKGCYTVRPMEPTWCGRLPLSEWDQIGTITHVPTIYFYTPSQNWLSPHSAIANTLKDSLSRALVPFYPLAGRLRSIGNGRLELDCNSMGARFIEAESTSALSNLGDYSPSSEYPHLAPRVDYTLPIHELPLVHVQVTRFTCGAISLGIAISHAVADGQSALHFISEWSRLARGEPMKTTPFLDRRVLRAGEPPSMPLPACHAYSHYECPPLLLGQISSTEQRKKKTTVAILKLSKDQVERLRRKANEALPRNDRSYTRYETVTGHVWISACKARGHKHDQLMGLGVCVDTRCRMQPPLPKGYFGNATLDVVATCVAGDLVEKPLGFVSRRIREAIEKVSDGYVRTGIEFLKNQEDLTRFQDLHAVRSDKGPFYGNPNMGVVSWLTLPINGLDFGWGKEVQMYPGTHEFDGDSVLLPGPDGDGSVLVAICLQVDHMDAFKKHFYEDIV* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2272 451 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 5 450 - -
Dod05g2272 451 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 5 450 - -
Dod05g2272 451 Gene3D - 1 209 IPR023213 -
Dod05g2272 451 Gene3D - 219 449 IPR023213 -
Dod05g2272 451 Pfam Transferase family 1 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g2272 Dod-Chr5 48837657 48839124 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g2272 1 448 Monolignol Biosynthesis Gene Families AT5G48930 39.778 1.04e-112 337
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2272 K13065 - gmx:100777007 667.151