Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2264 ATGGAGGGGCAACCAGCTAAACGCAGACGTGTCTACTCTCTGGAAGCAAACAAAGTAGTGCAATCTATGTTCACTAGAAATTATGTGAACTATTTAGTTCCAGCTTTGATGAAGATAAAGGAAAAGAGCATTTCTGCAGAAGATTGCAGCCATTGTGATTTCAAGAATGTTGTCAAGTATGAAGTGGACATGGCAATGGCCTTCTCAGCACAAGGCTTTGCATGGAGTCATGGCCTAAAAGTCAAGCTTCAAAGGGATCATGTGAATGCAGCTACAAGCACTACTAGCTTTGTTGAAAACGAAGCTGGCGAAGGTTCATCTTTGAATCACAACCAAAATGAAATGCTCCCATTCTTCTCTTCAAACCCTAGTTCAAAGTCTCAGGTTGAGACTAATTTGGTGAGCAATAATTCTGAGTCCAAGGACACGCCACAAATGAATAAAGATTATTTTGCCGGAGAAGGTAATGATGAAGATGAGGACATGATGATCAAGAGCCAGTTGAGAAGCCTAAGAAGGATGATACCTGGAGGAGAAGACATGTGTGATGAACAAATGGTTACCGAACTAGAGAGTTATATAAGCTGTTTGCAAATGCAGGTGAATGTTCTTCAATGCCTGCTTGCTGAGACGCCTTGA 639 0.4163 MEGQPAKRRRVYSLEANKVVQSMFTRNYVNYLVPALMKIKEKSISAEDCSHCDFKNVVKYEVDMAMAFSAQGFAWSHGLKVKLQRDHVNAATSTTSFVENEAGEGSSLNHNQNEMLPFFSSNPSSKSQVETNLVSNNSESKDTPQMNKDYFAGEGNDEDEDMMIKSQLRSLRRMIPGGEDMCDEQMVTELESYISCLQMQVNVLQCLLAETP* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2264 212 CDD bHLH_AtIBH1_like 159 208 IPR044549 GO:0006355
Dod05g2264 212 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 3 210 IPR044660 GO:0006355
Dod05g2264 212 PANTHER TRANSCRIPTION FACTOR BHLH146 3 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g2264 Dod-Chr5 48779821 48781282 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g2264 7 83 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30180 46.753 6.81e-15 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2264 - - aprc:113852314 251.906
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g2264 05 48779821 48781282 Dod03g1424 03 18586579 18587855 PCT