Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2237 ATGGATACTGATGACGAGTGCTCAGTTGTTCTTGAGTTGTCTGAAAATGATCCTTTTTTTGATAAAAAGAAGATATTACTACAAAATAAGGGTTTTAGACCCAAGGAAAGGATATATCTTAGGAGCTCCTCAAAACCTGGTTGGATGAATGCTACTGTAAAGGTTTTACTACAGATTGCGCGAATTGTACAATTAAATGAGCTGGAGCTTTATTTTGCTGAAGATGACGGCTCTACCTCAGTGGAATTCTACAGCCCCAGGAATGAGTTGGAGGCTCTCAATTCAATTCTTTCACTTACTGACATATCACTTTCTTGCTGTACACATCTCCATACAAATATCCTGCAAGAGTTACGGCAAACAATTCTTGATTTGATTTCTGATTCTGGGAACAAGTACAGTGTGAAGGGAATAGTTGAAAGTGATCACAGTTGTGACCAGGAAGAACGCCTGATACAATGGGCTGAAAGCAATGGTGCAAGGACACGGCTAAATATAGCTCATGTCCAAGGAGCAGGCCGGGGTGCAAGAGCAAGGGAAGATTTAGAAGTTGGAGACATTGCTTTGGAAATTCCTGTTTCCATTATCATTTCTGAGGAGCTTGTGCACGAAACTGACATCTATCATGTCTTAAAAGAGGTAGATGGCATATCTTCTGAGACAATATTGCTGTTATGGAGTATGAAAGAGAAGTACAACTGTGATTCAAAATTCAAAATTTACTTTGACACACTCCCCGAAAAATTTAATACAGGATTGAGTTTTGGCATTGAAGCAATTACAATGTTAGATGGAACCTTGTTATTGGAAGAGATAATGCAAGCAAGGCAGCACCTGCATGCTCAATATGATGAGTTGTTCCCCACGCTGTGCAATGAATTTCCCAACATATTTCCACCAGAGCTGTATACATGGGAGAAATTTTTATGGGCTTGTGAACTTTGGTACTCCAATAGCATGAAGATAATGTTTCCTGATGGAAAGCTGAGAACATGCTTGATCCCTATTGCTGGCTTTCTTAATCATTCATTGTGCCCACATATTTTGCACTATGGCAAAGTTGATACCGCTACAAATTCGTTGAAATTTTGTCTATCAAGACCTTGCAAATCTGGAGAAGAATGCTGCTTAAGCTATGGGAACTTCCCCAGCTCTCATCTAATTACCTTTTATGGTTTCTTACCACAAGGAGACAACCCATATGATGTCATTCCATTGGACATTGATGGTTCTGATGTTTACTCTATTGAGGATAAACCCCTTTCCAACTGGACGACTCACATGGTGCGTGGTACTTGGCTCTCTAACAATCAAAGCGTATTCTATTATGGCCTTCCCTCTCCATTATTGGACCATCTTCGTAGATCTCGAAGTCCCATGCTGCAGACCAAGACCTTCCTGCAAGGAAACTTGGAAAATGAGCTGTTAGTTCTTGAAGATCTGATATATATCTTCGACGACGTGATGGACAACATTGGTGAGATCGATCTTGATGACAGAGAAAATTGCAATTGGGATGCGAAATTGGCAATGGATTTCAAAAATCTTCAAAGAAGAATTGCTTGTTCCGTTTCAACTTCATGTCATGCTGGTTTCGACACGGTGAAGAATGAATTATACAAGTGCATGGCCGAGGACATCCTAGGCTAA 1650 0.403 MDTDDECSVVLELSENDPFFDKKKILLQNKGFRPKERIYLRSSSKPGWMNATVKVLLQIARIVQLNELELYFAEDDGSTSVEFYSPRNELEALNSILSLTDISLSCCTHLHTNILQELRQTILDLISDSGNKYSVKGIVESDHSCDQEERLIQWAESNGARTRLNIAHVQGAGRGARAREDLEVGDIALEIPVSIIISEELVHETDIYHVLKEVDGISSETILLLWSMKEKYNCDSKFKIYFDTLPEKFNTGLSFGIEAITMLDGTLLLEEIMQARQHLHAQYDELFPTLCNEFPNIFPPELYTWEKFLWACELWYSNSMKIMFPDGKLRTCLIPIAGFLNHSLCPHILHYGKVDTATNSLKFCLSRPCKSGEECCLSYGNFPSSHLITFYGFLPQGDNPYDVIPLDIDGSDVYSIEDKPLSNWTTHMVRGTWLSNNQSVFYYGLPSPLLDHLRRSRSPMLQTKTFLQGNLENELLVLEDLIYIFDDVMDNIGEIDLDDRENCNWDAKLAMDFKNLQRRIACSVSTSCHAGFDTVKNELYKCMAEDILG* 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2237 549 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 3 545 - -
Dod05g2237 549 Gene3D - 2 121 IPR036464 -
Dod05g2237 549 Pfam SET domain 173 380 IPR001214 GO:0005515
Dod05g2237 549 Gene3D set domain protein methyltransferase, domain 1 145 394 - -
Dod05g2237 549 SUPERFAMILY SET domain 148 401 IPR046341 -
Dod05g2237 549 CDD SET_LSMT 163 394 - -
Dod05g2237 549 ProSiteProfiles SET domain profile. 162 380 IPR001214 GO:0005515
Dod05g2237 549 PANTHER BNAA07G01600D PROTEIN 3 545 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Dod05g2237 SET 3.7e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2237 K19199 - gmx:100778605 959.903