Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2231 ATGGAACCAACAACAAACGATCACGAGGAGTTCATTTTCCGTTCCAAGCTCCCCGACATTTACATCCCAACACACCTCCCTCTCCACACCTACTGCTTCGAGAATCTTTCCCAGTTCAAGGACCGCCCTTGCCTCATCAATGGCACCACCGGCGAGACCTTCACCTACGCCGCCGTCGAACTCACCGCCAGAAAAGTCGCCGCTGGCCTCAACAAGCTCGGCATCGAGCAAGGCGATGTCATCCTCCTCCTCCTCCAGAACTGCCCCCAGTTCGTCTTCGCCTTCCTCGGCGCCTCCTACCGCGGCGCCACAGTCACCACCGCCAACCCCTTCTACACCCCCGCCGAGGTGGCCAAACAGGCCATCGCCTCCAACACCAAGCTCATCATAACGCAATCCTCCTTCGTCGAAAAAGTGAAGGACTTCGCAAGGGAAAATAACGTCAAGGTGATGTGCATCGACGCTCCACCGCCGCTTCAGGGCGGTTATCTTCACTTCTCGGCGTTGACGGATGCCGACGAGGGCGACATCCCCGCCGTGAAAATCTCCCCCGACGATGTCGTTGCGCTGCCGTATTCCTCCGGCACCACGGGGCTCCCGAAAGGCGTGATGCTAACACACAAAGGGTTGGTTACGAGCGTGGCGCAACAGGTTGATGGACAGAACCCGAACCTGTATTTTGACTGCAACGACGTTCTTGTGTGCGTGCTTCCGCTGTTCCACGTTTACTCGCTGAACTCTGTTCTGCTGTGTGGGCTTCGAGTTGGTGCTGCCATATTGATCATGCAGAAGTTTGAGATCGTTTCGCTGCTTGAGCTGGTGGAGAAACATAAGGTGAGTGTGGCGCCGTTTGTGCCGCCGATCGTGTTGGCGATTGCGAAGAGCACCGACGTGGAGCGGTACGACCTGTCGTCCATTCGGATGGTGATGTCCGGCGCGGCGCCCATGGGAGAGGACCTTGAGGACGCTGTCAGGGCCAAGCTTCCCAACGCCACCGTTGGACAGGGTTATGGGATGACAGAAGCAGGCCCCGTGCTTTCAATGTGCTTAGCGTTTGCTAAGGAACCTTTCGAGGTCAAATCAGGTGCATGCGGGACCGTCATAAGAAATGCAGAGATGAAGATCGTCGACCCGGAGACTGGCGCTTCCCTTCCGAGGAATCATGCTGGAGAGATTTGCATCAGAGGCAACCAGATTATGAAAGGTTACCTAAATGACCCAAAGGCCACAGAAAGTACTATTGACAAAGGGAGATGGTTGCACACGGGTGATATTGGATATATCGACGATAACGATGAACTATTCATCGTTGATCGGTTAAAGGAGTTGATCAAATACAAAGGGTTTCAAGTGGCTCCTGCTGAGCTCGAAGCCATGTTGATTGCTCACCCAAACATTTCTGATGCAGCTGTTGTAGCCATGAAAGATGAGGCCGCAGGAGAGGTTCCCGTTGCATATGTTGTAAGATCAAACGATTCAAAGACCTCGGAGGATGAAATTAAGCAATACATCTCAAAGCAGGTTGTGTTTTACAAGAGAATCAATAAGGTTTTCTTTGTGGATTCAATTCCAAAGGCACCCTCAGGCAAGATTTTGAGGAAAGACCTCAGAGCAAGGCTTGCAGCCGGTCTTGCCGTTTAG 1641 0.5326 MEPTTNDHEEFIFRSKLPDIYIPTHLPLHTYCFENLSQFKDRPCLINGTTGETFTYAAVELTARKVAAGLNKLGIEQGDVILLLLQNCPQFVFAFLGASYRGATVTTANPFYTPAEVAKQAIASNTKLIITQSSFVEKVKDFARENNVKVMCIDAPPPLQGGYLHFSALTDADEGDIPAVKISPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGQNPNLYFDCNDVLVCVLPLFHVYSLNSVLLCGLRVGAAILIMQKFEIVSLLELVEKHKVSVAPFVPPIVLAIAKSTDVERYDLSSIRMVMSGAAPMGEDLEDAVRAKLPNATVGQGYGMTEAGPVLSMCLAFAKEPFEVKSGACGTVIRNAEMKIVDPETGASLPRNHAGEICIRGNQIMKGYLNDPKATESTIDKGRWLHTGDIGYIDDNDELFIVDRLKELIKYKGFQVAPAELEAMLIAHPNISDAAVVAMKDEAAGEVPVAYVVRSNDSKTSEDEIKQYISKQVVFYKRINKVFFVDSIPKAPSGKILRKDLRARLAAGLAV* 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2231 546 SUPERFAMILY Acetyl-CoA synthetase-like 8 542 - -
Dod05g2231 546 Pfam AMP-binding enzyme 34 446 IPR000873 -
Dod05g2231 546 PANTHER 4-COUMARATE--COA LIGASE 2-LIKE 7 541 - -
Dod05g2231 546 Pfam AMP-binding enzyme C-terminal domain 455 530 IPR025110 -
Dod05g2231 546 Gene3D - 441 542 IPR045851 -
Dod05g2231 546 Gene3D - 4 440 IPR042099 -
Dod05g2231 546 CDD 4CL 22 536 - -
Dod05g2231 546 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 7 541 - -
Dod05g2231 546 ProSitePatterns Putative AMP-binding domain signature. 190 201 IPR020845 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g2231 Dod-Chr5 48355877 48367004 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g2231 4 508 Monolignol Biosynthesis Gene Families AT1G51680 69.608 0.0 724
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2231 K01904 - gmx:100779668 929.858
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g2231 05 48355877 48367004 Dod05g2231 05 48355877 48367004 ECH