Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2230 ATGGACGAACCTCAACAACAACCCACTCCCACCCAAGACGAATTCATCTTCCGCTCCAAGCTCCCCGACATTCCCATCCCCACCCACCTCCCATTACACTCCTACTGCTTCCAGAACCTTCCAAACTTCCGCCACCGCCCATGCCTCATCGACGCCGAAACCAACGCCACCCTCACCTACTCCGACGTCCACCTCGCCTCCCTCCGCATCGCCGCCGGCCTCCACAACATCGGCATCCGCCAGGGCGACGTCATCATGCTCCTCCTCCGTAACTGCCCCCAGTTCGCCCTCGCCTTCCTCGGCGCGTCCCGCCGCGGCGCCGCCATCACCACCGCCAACCCCTTCTACACCCCGGCCGAGCTCGCCAAGCAGACCACCGCCACCAAGACCCGCCTCATCATAACGCAATCCGCGTACGTGGAGAAAATCAAGGACTTCGCGGACAAAAACGACGTCATGATCATGTGCATCGATTCATCTGAAGAACAAGAGGAAAAAGACGGTGTTCTGAACTTCTCCGTGCTTACAAACGCTGAAGAGAACGACGCGCCTGATGTTAACATAAGCCCAGACGACGTCGTTGCGATCCCTTTCTCTTCGGGGACCTCGGGGCTTCCCAAGGGAGTTATGTTGACGCACAGAAACTTGGTGACCACGGTGGCGCAGCTTGTTGACGGTGAGAGCCCTCACCAGTACACGCACAGCGAGGACGTGCTACTCTGCGTGCTGCCTATGTTTCACATCTATGCGCTCAACTCCATTTTGCTGTGCGGGATTCGTGCCGGTGCGGCGGTTCTGATCGTGCAGAAGTTCGAGATCACGACGCTGTTGGAGCTTATACAGAAGTACAGGGTGACGGTTGCGTCGTTAGTGCCGCCGATTGTTCTGGCGCTGGTGAAGTGCGGGGATGCCCATAGGTATGATTTGTCGTCTGTTCGGGCGGTGATTACTGGTGCTGCTCCCATGGGAATGGAGCTTCAAGAGGCCGTGAAGGCTAGGCTTCCGCATGCCGTACTTGGACAGGGCTATGGGATGACAGAGGCAGGGCCACTTGCCATAAGCTTAGCATTTGCAAAGGAACCGTTCGAGATAAAATCAGGTGCATGCGGAACCGTAGTAAGAAATGCTGAGATGAAAATCGTGGACACTGAGACGGGCACTTCGCTTCCACGAAACAAAGCCGGTGAAATCTGCATTAGAGGCACAAAGGTCATGAAAGGGTACCTAAATGACCCAGAGGCCACAGAGAGAACCATAGACAAAGAGGGATGGCTGCACACAGGTGATATTGGTTACATTGATGATGATGATGAGCTCTTCATCGTTGATCGGTTGAAGGAGCTAATCAAATATAAAGGATTTCAAGTGGCTCCTGCTGAGCTAGAAGCAATGTTGATTGCCCACCCAAACATTTCTGATGCTGCCGTTGTACCCATGAAAGATGAAGCTGCGGGAGAAGTTCCAGTAGCATTTGTTGTTAGATCAAATGGTTCTAAGATCACCGAGGATGAAATCAAGCAATACATTTCACAACAGGTGGTATTTTACAAGAGAATCAACAGAGTTTTCTTCACGGACACCATCCCTAAGGCAGCCTCAGGCAAAATTCTACGAAAGGAATTAACTGCAAGGGTCAACGAAGGTCTGGTGGCCAATTAA 1659 0.5316 MDEPQQQPTPTQDEFIFRSKLPDIPIPTHLPLHSYCFQNLPNFRHRPCLIDAETNATLTYSDVHLASLRIAAGLHNIGIRQGDVIMLLLRNCPQFALAFLGASRRGAAITTANPFYTPAELAKQTTATKTRLIITQSAYVEKIKDFADKNDVMIMCIDSSEEQEEKDGVLNFSVLTNAEENDAPDVNISPDDVVAIPFSSGTSGLPKGVMLTHRNLVTTVAQLVDGESPHQYTHSEDVLLCVLPMFHIYALNSILLCGIRAGAAVLIVQKFEITTLLELIQKYRVTVASLVPPIVLALVKCGDAHRYDLSSVRAVITGAAPMGMELQEAVKARLPHAVLGQGYGMTEAGPLAISLAFAKEPFEIKSGACGTVVRNAEMKIVDTETGTSLPRNKAGEICIRGTKVMKGYLNDPEATERTIDKEGWLHTGDIGYIDDDDELFIVDRLKELIKYKGFQVAPAELEAMLIAHPNISDAAVVPMKDEAAGEVPVAFVVRSNGSKITEDEIKQYISQQVVFYKRINRVFFTDTIPKAASGKILRKELTARVNEGLVAN* 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2230 552 Pfam AMP-binding enzyme C-terminal domain 460 535 IPR025110 -
Dod05g2230 552 PANTHER 4-COUMARATE:COA LIGASE-LIKE PROTEIN 11 545 - -
Dod05g2230 552 SUPERFAMILY Acetyl-CoA synthetase-like 14 547 - -
Dod05g2230 552 Pfam AMP-binding enzyme 43 451 IPR000873 -
Dod05g2230 552 Gene3D - 446 550 IPR045851 -
Dod05g2230 552 Gene3D - 8 445 IPR042099 -
Dod05g2230 552 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 11 545 - -
Dod05g2230 552 CDD 4CL 26 541 - -
Dod05g2230 552 ProSitePatterns Putative AMP-binding domain signature. 196 207 IPR020845 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g2230 Dod-Chr5 48346557 48352955 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g2230 5 513 Monolignol Biosynthesis Gene Families AT1G51680 65.497 0.0 675
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2230 K01904 - gmx:548034 905.205