Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2222 ATGTGTAATAACAAAGGGTTTCAATGCTTGAGCGAGTCTGAGAATCTAATCGATCATAGAAGACAACAACAACAGCAGCAGCAACAACAACACTATTCTATGGATAGCCCCACTGGGGTTCGATCACCGGCTACCGGTTCGACACCGGGTTCCACCGATGATAGCCGGCGCGTGAAGTTCTTGTGCAGCTTCCTTGGGAGCATAATGCCCCGCCCACAAGATGGGAAGCTGCGTTATGTTGGTGGAGAGACACGAATTGTGAGTGTTCCTAGGGATGTTAGCTATGAGGAGTTGATGGGGAAGATGAGAGAGCTCTATGATGGTGCTGCTGTGTTGAAGTACCAGCAGCCTGATGAGGATCTTGATGCCCTTGTCTCTGTTGTCAATGATGACGATGTAGTTAACATGATGGAGGAGTATGACAAGTTGGGGTCTGGGGATGGATTCACTAGGCTCAGGATTTTCTTGTTTTCGCAATTCGAGCAGGATGGTGGCTCCTCACACTTCATTGATGTGGATGACACTGAGAAGAGGTATGTCGATGCCTTGAATAGTTTGAACGATGCTTCTGATTTTAGGAAGTTGCAACAATCGGAGTTTGCTTTGATGAGCCCTGCAGAGGATATCCATGTAGCTGAACAGTTCTTTAGTCCAATTAGTGTGGAGAGTGGGATTCTTAGTCAGAGAAGTGGGGAACTGTCTATGTCACAGCATAATTTGCATCATCTCGCGATGCTGCAGCTGCAGCAGCAGCAACAACAACAGCCTATGGGGCAGAGGTATAATGAAACGGATGCTCCATGGAATCCTGCCTATTACTCTCCTAGGCATCATGGTCACCATGACTCAAGATCGTTGGTGGAATATCCAACTTCTCCTTCGGGTACAAAGTACCGTGTGCCATTTCCTGATATACCGGATAAGAGCATCGATAGAGTTTCGGAAGAGTATGCTAGGCTTCATGTGAATCACCATCCTGTGTATGACAACCAACAACAATATTCTGAAAATGTGGTGTGGGTGCCGACCAGTGCAGCTCATGGTGATAAGACAGGTTTTCCAGGCAATATTCTTCATGGCAGCCATGTTCTTGATGGGAACAGTATATGTGAGCACTGCCGTATGAATTTTCAGAGAGGTCAACCACATGTGGAGCATCCTAATATCAGTAATGGATTTCCGCCAGTTGGTAATCCATCTGGAGAGTGCCCCTCAAACAGGGATACTTTCATGGTGAATGCGGATGCAATGTTTCATCCTGCAGTGCATCCTAATGAGGAATTGAGAGGAAATGTCTCTGTGTGTGGGAGAGTGAATGATCATTATGGTGGTGATGTTCCTGTTGTAAATTTCTCCATTGGACATGGCAGTGTGACTGATGGACATACCTTGTCTTCCAATTATATTCATCAACGAGCTGGACCCGAATTGGGACCTGAACTGTTTCCTGACCAAACTGTGCCTGCTATACCGCATCTACACATTCCTTCTCTGGAAGAGCGCAGTGTGCGGTATGGAAACCCGCCTTCTCCTTATGGAGTAGATAGTCACTATGCTTTGCCTCGTGGACATATATCTGGGCATGCTTTTTGGAGAAACACTCCACCTCCAGTTCATATTGGACCATCTTATGAGGCAACTACTCAGCCTCAGCAAGCGAATGGTATGATAAATGCTGGATTAGTCAGGGGAGAGGGCAGTCCAGGATTTTTCATTGGACCAGATGGTCAAAATGCTTGGGTTGATTCCTCACAGAAATTGTCAGGTCATGATGGGCCAGACATCCTGGAACATCCTTATGCACATGGTCTGAAATTGAACCCTAAGGGCGTTGGTCAGGAAAATCAACACCCAATTATGGTAGATGCCATTCATTCCCCGCAGGACGCTAACTCTGGTTTGGAACCAGTGCAGCTGTTAAAATCACCTGTTAATATTGTTCACAACCAGGAGGTTTCAAGAAATGATACTAATATGACTGAAGCAATGAGGTTGCTATCTCAAAGTGCACAAGGAGATGGAAGAGAGGAAAAAACTGAGGACAACGTTGAAAAGTCACCTGCAAAGATGCAGAGTATATCTTTTTCAGAGCAAAATAAAATGTCTGAGAGTGTATGCAAAGCTGCCACTCCGGTTGAGTCTTGTAGTTCAAACTCAAAACCTGCAACAATGTGTGAAAATGTTGAGAAATTGGCTGATAAGGACCCTTTTGAACCAGAAGATTCTAAGCATTTGGCTGATCAATTCAGCTTCTTGCCTGAGTTGATTGCTTCTGTAAAAAGGGCTGCATTGGAAGTTGCTGAGGTGAAAGCTACAGATGATGAGAATGCCAATCCTCAGAAACAGAACTCAACTACCAAAGAAGAAAGAGCAAATGAAACAGAACCAGTGAATGCTCATGGTGATTTAGAACTGGACTCTGACAATGACCACATAGATACTTCCAAAATTGAGCCAACAAAGGCTGAGGAAGAAGCAATTGCTAGGGGGTTGCAGACAATTAAAAATGATGATTTGGAGGAGATCCGTGAACTAGGTTCTGGAACTTATGGGGCTGTTTATCATGGGAAATGGAAAGGTTCTGATGTTGCCATTAAGAGAATAAAAGCCAGTTGTTTTGCTGGAAGGCCATCTGAAAGAGCTAGACTGATTGCAGATTTCTGGAAAGAGGCATTGATGCTTAGTTCATTGCATCATCCAAATGTTGTTTCCTTCTATGGTATTGTTCGTGATGGCCCTGATGGTTCTTTAGCAACTGTGACAGAATTCATGGTTAATGGATCTTTGAAACAGTTCTTGCATAAGAAAGACAGAACGATAGATCGTCGGAAGAGGCTCATTATTGCTATGGATGCTGCTTTTGGGATGGAGTATTTGCATGGAAAGAACATTGTGCATTTTGATTTGAAATGTGAGAATCTATTGGTCAATATGAGAGATCCACAACGCCCTGTCTGCAAGATTGGTGATTTAGGTTTATCAAAGGTAAAACAGAACACACTAGTGTCAGGAGGGGTACGGGGAACTTTGCCATGGATGGCACCTGAACTTCTTAGTGGGAAAAGCAATATGGTGTCAGAAAAGATTGACTGTTTATTCATTCGGGATAGTCATGTGGGAGTTACTCACGGGCAATGA 3138 0.4433 MCNNKGFQCLSESENLIDHRRQQQQQQQQQHYSMDSPTGVRSPATGSTPGSTDDSRRVKFLCSFLGSIMPRPQDGKLRYVGGETRIVSVPRDVSYEELMGKMRELYDGAAVLKYQQPDEDLDALVSVVNDDDVVNMMEEYDKLGSGDGFTRLRIFLFSQFEQDGGSSHFIDVDDTEKRYVDALNSLNDASDFRKLQQSEFALMSPAEDIHVAEQFFSPISVESGILSQRSGELSMSQHNLHHLAMLQLQQQQQQQPMGQRYNETDAPWNPAYYSPRHHGHHDSRSLVEYPTSPSGTKYRVPFPDIPDKSIDRVSEEYARLHVNHHPVYDNQQQYSENVVWVPTSAAHGDKTGFPGNILHGSHVLDGNSICEHCRMNFQRGQPHVEHPNISNGFPPVGNPSGECPSNRDTFMVNADAMFHPAVHPNEELRGNVSVCGRVNDHYGGDVPVVNFSIGHGSVTDGHTLSSNYIHQRAGPELGPELFPDQTVPAIPHLHIPSLEERSVRYGNPPSPYGVDSHYALPRGHISGHAFWRNTPPPVHIGPSYEATTQPQQANGMINAGLVRGEGSPGFFIGPDGQNAWVDSSQKLSGHDGPDILEHPYAHGLKLNPKGVGQENQHPIMVDAIHSPQDANSGLEPVQLLKSPVNIVHNQEVSRNDTNMTEAMRLLSQSAQGDGREEKTEDNVEKSPAKMQSISFSEQNKMSESVCKAATPVESCSSNSKPATMCENVEKLADKDPFEPEDSKHLADQFSFLPELIASVKRAALEVAEVKATDDENANPQKQNSTTKEERANETEPVNAHGDLELDSDNDHIDTSKIEPTKAEEEAIARGLQTIKNDDLEEIRELGSGTYGAVYHGKWKGSDVAIKRIKASCFAGRPSERARLIADFWKEALMLSSLHHPNVVSFYGIVRDGPDGSLATVTEFMVNGSLKQFLHKKDRTIDRRKRLIIAMDAAFGMEYLHGKNIVHFDLKCENLLVNMRDPQRPVCKIGDLGLSKVKQNTLVSGGVRGTLPWMAPELLSGKSNMVSEKIDCLFIRDSHVGVTHGQ* 1046
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2222 1045 CDD PB1_UP2 61 157 - -
Dod05g2222 1045 ProSiteProfiles Protein kinase domain profile. 839 1045 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g2222 1045 ProSitePatterns Protein kinases ATP-binding region signature. 845 866 IPR017441 GO:0005524
Dod05g2222 1045 Pfam PB1 domain 73 158 IPR000270 GO:0005515
Dod05g2222 1045 SUPERFAMILY CAD & PB1 domains 74 161 - -
Dod05g2222 1045 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 34 1031 - -
Dod05g2222 1045 MobiDBLite consensus disorder prediction 20 54 - -
Dod05g2222 1045 SUPERFAMILY Protein kinase-like (PK-like) 828 1030 IPR011009 -
Dod05g2222 1045 MobiDBLite consensus disorder prediction 770 810 - -
Dod05g2222 1045 Gene3D - 76 160 - -
Dod05g2222 1045 Gene3D Phosphorylase Kinase; domain 1 825 924 - -
Dod05g2222 1045 Pfam Protein tyrosine and serine/threonine kinase 840 1022 IPR001245 GO:0004672|GO:0006468
Dod05g2222 1045 PANTHER - 34 1031 - -
Dod05g2222 1045 ProSitePatterns Serine/Threonine protein kinases active-site signature. 964 976 IPR008271 GO:0004672|GO:0006468
Dod05g2222 1045 SMART serkin_6 839 1041 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g2222 1045 SMART PB1_new 72 157 IPR000270 GO:0005515
Dod05g2222 1045 MobiDBLite consensus disorder prediction 668 690 - -
Dod05g2222 1045 MobiDBLite consensus disorder prediction 18 55 - -
Dod05g2222 1045 Gene3D Transferase(Phosphotransferase) domain 1 925 1031 - -
Dod05g2222 1045 MobiDBLite consensus disorder prediction 671 685 - -
Dod05g2222 1045 MobiDBLite consensus disorder prediction 786 810 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g2222 Dod-Chr5 48227274 48234539 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g2222 53 1031 MAP Kinase Kinase Kinase AT5G57610 51.888 0.0 897
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Dod05g2222 PK_Tyr_Ser-Thr 6.7e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2222 - - gmx:100779077 1521.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g2222 05 48227274 48234539 Dod05g2222 05 48227274 48234539 ECH
Dod05g2222 05 48227274 48234539 Dod03g1756 03 26055364 26063247 PCT